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Do's and Don'ts of Cryo-electron Microscopy: A Primer on Sample Preparation and High Quality Data Collection for Macromolecular 3D Reconstruction
Published on: January 9, 2015
The organization of mature Rous sarcoma virus as studied by cryoelectron microscopy
R L Kingston1, N H Olson, V M Vogt
1Institute of Molecular Biology, Howard Hughes Medical Institute, University of Oregon, Eugene, OR 97403, USA. richard@uoxray.uoregon.edu
This study used transmission electron microscopy to reveal the structure of Rous sarcoma virus (RSV). Findings show RSV has a distinct core structure, not tightly controlled in size, and its RNA may not fill the core.
Area of Science:
- Virology
- Structural Biology
- Electron Microscopy
Background:
- Rous sarcoma virus (RSV) is a retrovirus with implications for cancer research.
- Understanding the structural organization of infectious virions is crucial for deciphering viral replication and assembly.
Purpose of the Study:
- To elucidate the three-dimensional organization of mature, infectious Rous sarcoma virus (RSV) particles.
- To characterize the morphology and dimensions of the viral core and its relationship to the overall virion size.
Main Methods:
- Transmission electron microscopy (TEM) of RSV suspended in vitreous ice.
- Advanced image processing techniques to analyze viral structure.
- Geometric probability methods to estimate core dimensions from projection data.
Main Results:
- RSV virions are spherical with a mean diameter of 127 nm, exhibiting size variability.
- The viral matrix protein is located beneath the lipid bilayer, with envelope proteins on the exterior.
- The retroviral core is essentially isometric, unlike lentiviruses, and displays a faceted or curved capsid structure.
- Core size is not tightly regulated and correlates positively with virion size.
- Serrations on the core suggest a repetitive molecular arrangement.
- Isolated cores demonstrate transient stability.
Conclusions:
- The study provides detailed structural insights into Rous sarcoma virus organization.
- Core size variability and its correlation with virion size suggest a flexible assembly process.
- The data indicate that the viral RNA may be loosely packed or does not occupy the entire core volume.
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