Mks1 in concert with TOR signaling negatively regulates RTG target gene expression in S. cerevisiae
Ivanka Dilova1, Ching-Yi Chen, Ted Powers
1Section of Molecular and Cellular Biology and Center for Genetics and Development, Division of Biological Sciences, University of California, Davis 95616, USA.
Abstract:
The target of rapamycin (TOR) signaling pathway allows eukaryotic cells to regulate their growth in response to nutritional cues. In S. cerevisiae, TOR controls the expression of genes involved in several nutrient-responsive biosynthetic pathways. In particular, we have demonstrated that TOR negatively regulates a concise cluster of genes (termed RTG target genes) that encode mitochondrial and peroxisomal enzymes required for de novo amino acid biosynthesis. TOR acts in part by regulating the subcellular localization of the Rtg1/Rtg3 transcription factor complex. Nuclear entry of this complex requires the cytoplasmic protein Rtg2, whose precise function has remained ill defined. Here we establish that the likely role of Rtg2 is to antagonize the activity of another protein, Mks1, which we demonstrate is itself a negative regulator of RTG target gene activation. Results of epistasis analyses suggest that Rtg2 and Mks1 act downstream of TOR and upstream of Rtg1 and Rtg3. Moreover, we find that Mks1 phosphorylation responds to TOR as well as to each of the Rtg1-Rtg3 proteins, indicative of complex regulation within this branch of TOR signaling. In addition to RTG target genes, microarray analysis reveals robust expression of lysine biosynthetic genes in mks1Delta cells, which depends on a functional RTG pathway. This latter result provides a molecular explanation for the previous identification of MKS1 as LYS80, a negative regulator of lysine biosynthesis [8].
Insights
The target of rapamycin (TOR) pathway regulates cell growth using Rtg2 and Mks1 proteins. Mks1 is a negative regulator of amino acid biosynthesis genes, and its activity is controlled by TOR signaling.
Area of Science:
- Cellular biology
- Molecular genetics
- Biochemistry
Background:
- The target of rapamycin (TOR) pathway is crucial for eukaryotic cell growth regulation in response to nutrient availability.
- TOR signaling influences gene expression in nutrient-responsive biosynthetic pathways in Saccharomyces cerevisiae.
- TOR regulates the subcellular localization of the Rtg1/Rtg3 transcription factor complex, impacting gene expression.
Purpose of the Study:
- To elucidate the function of the Rtg2 protein in TOR signaling.
- To identify and characterize the role of Mks1 as a regulator of RTG target genes.
- To understand the complex regulatory network within this branch of TOR signaling.
Main Methods:
- Epistasis analyses were performed to determine the order of action of TOR, Rtg2, Mks1, Rtg1, and Rtg3.
- Protein phosphorylation was analyzed to understand the regulation of Mks1.
- Microarray analysis was used to identify genes regulated by Mks1 and the RTG pathway.
Main Results:
- Rtg2 antagonizes the activity of Mks1, a negative regulator of RTG target gene activation.
- Mks1 and Rtg2 act downstream of TOR and upstream of the Rtg1/Rtg3 transcription factors.
- Mks1 phosphorylation is responsive to TOR and Rtg1/Rtg3 proteins, indicating complex regulation.
- Microarray analysis revealed that lysine biosynthetic genes are robustly expressed in mks1Δ cells, dependent on the RTG pathway.
Conclusions:
- Rtg2 functions by antagonizing Mks1, a key negative regulator in the TOR-controlled amino acid biosynthesis pathway.
- The study clarifies the roles of Rtg2 and Mks1 in TOR signaling and their interaction with the Rtg1/Rtg3 complex.
- Mks1 is identified as a crucial link between TOR signaling and the regulation of amino acid and lysine biosynthesis.
Related Concept Videos
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
PI3K/mTOR/AKT Signaling Pathway
MAPK Signaling Cascades
Eukaryotic Transcription Inhibitors
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
Riboswitches
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
TGF - β Signaling Pathway


