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Updated: Aug 9, 2026

Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency
Published on: June 16, 2011
[Genomic instability in picornaviruses]
1Chumakov Institute of Poliomyelitis and Virus Encephalites, Russian Academy of Medical Sciences, Moscow State University, Moscow, 119899 Russia. agol@belozersky.msu.ru
Abstract:
Picornaviruses are small animal RNA viruses and include wtiological agents of poliomyelitis, foot and mouse disease, hepatitis A, etc. Replication of their genome results in many mutations, which are close in number to a viability threshold. Hence every virus population contains a great variety of genomes and represents a quasispecies. Covalent rearrangements (deletions, insertions, recombination) also contribute to genome variation and arise by replicative and nonreplicative mechanisms, which are still poorly understood. Only a minor fraction of all new changes is fixed during evolution. The fixation is based on two principally different ways of selection: with (positive and negative selection) and without (random selection of nonrepresentative variants) regard to the phenotype. In natural evolution of picornaviruses, the latter way is prevalent, and most fixed mutations are phenotypically neutral. To understand the mechanisms of evolution, it is necessary to evaluate the biological significance of particular genetic changes. Several new approaches to this problem have recently been proposed.
Insights
Picornaviruses rapidly mutate, forming diverse quasispecies. Their evolution primarily relies on neutral genetic drift rather than selection, with new methods emerging to study these changes.
Area of Science:
- Virology
- Evolutionary Biology
- Genetics
Context:
- Picornaviruses are small RNA viruses responsible for diseases like polio and hepatitis A.
- Their rapid replication generates numerous mutations, creating a high degree of genomic diversity within populations (quasispecies).
- Genome variation also arises from covalent rearrangements like deletions, insertions, and recombination, through poorly understood mechanisms.
Purpose:
- To explore the evolutionary mechanisms of picornaviruses.
- To understand the role of mutation, genome variation, and selection in picornavirus evolution.
- To highlight the need for and recent advances in evaluating the biological significance of genetic changes.
Summary:
- Picornavirus replication leads to high mutation rates, resulting in quasispecies with diverse genomes.
- Genome variation is further influenced by deletions, insertions, and recombination.
- Evolutionary fixation of genetic changes predominantly occurs through random selection of neutral variants, rather than phenotype-directed selection.
Impact:
- Understanding picornavirus evolution is crucial for disease control and antiviral development.
- New approaches are being developed to assess the biological impact of specific genetic alterations.
- This research contributes to the broader understanding of viral evolution and adaptation.
Related Concept Videos
Viral Recombination
Viral Mutations
Retroviruses
piRNA - Piwi-interacting RNAs
Size and Structure of Viral Genomes
Viruses with RNA Genomes

