Online genomics facilities in the new millennium
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Updated: Oct 1, 2026

Transcriptomic Analysis of C. elegans RNA Sequencing Data Through the Tuxedo Suite on the Galaxy Project
Published on: April 8, 2017
Dmitrij Frishman1, Andreas Kaps, Hans-Werner Mewes
1Institute for Bioinformatics, GSF - National Research Center for Environment and Heatlh, Ingolstädter Landstrasse 1, 85764 Neueherberg, Germany. d.frishman@gsf.de
Abstract:
The review begins by providing a brief typology of biological databases on the Internet, illustrated by examples of the most influential resources of each kind. We then take an insider look at one typical on-line genomic resource -- the yeast genome database hosted at the Munich Information Center for Protein Sequences (MIPS) -- and explain how and why it has evolved from a basic sequence repository to a multidomain knowledge base. The role of community efforts in curating and annotating genome data is discussed. The crucial role of data integration and interoperability in developing next-generation genomic facilities is underscored.
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