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Some notes on 2-D graphical representation of DNA sequence
Yachun Liu1, Xiaofeng Guo, Jin Xu
1Department of Mathematics and Physical Science, Institute of Engineering and Technology, Nanhua University, Hengyang, Hunan 421001, P. R. China. liuyachun65@263.net
Abstract:
Some 2-D and 3-D graphical representations of DNA sequences have been given by Nandy, Leong and Mogenthaler, and Randic et al., which give visual characterizations of DNA sequences. In this paper, we presented a novel graphical representation of DNA sequences by taking four special vectors in 2-D Cartesian coordinate system to represent the four nucleic acid bases in DNA sequences, so that a DNA sequence is denoted on a plane by a directed walk. It is shown that the new graphical representation of DNA sequences has lower or nondegeneracy.