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Identification of Reverb(alpha) as a novel ROR(alpha) target gene
Philippe Delerive1, William W Chin, Chen S Suen
1Department of Gene Regulation, Bone and Inflammation Research, Eli Lilly Research Laboratories, Lilly Corporate Center, Indianapolis, Indiana 46285, USA. delerive@hotmail.com
Abstract:
The nuclear receptor superfamily comprises a large number of ligand-activated transcription factors that are involved in numerous biological processes such as cell proliferation, differentiation, and homeostasis. ROR(alpha) (NR1F1) and Reverb(alpha) (NR1D1) are two members of this family whose biological functions are largely unknown. In addition, no ligand has been yet identified for these two receptors; therefore, they are referred as orphan receptors. Here, we show that ROR(alpha) and Reverb(alpha) are expressed with a similar tissue distribution and are both induced during the differentiation of rat L6 myoblastic cells. Ectopic expression of ROR(alpha)1 in L6 cells significantly induces Reverb(alpha) expression as demonstrated by Northern blot analysis. Using reverse transcription-PCR to analyze Reverb(alpha) gene expression from staggerer mice, we found that there was a significant reduction of Reverb(alpha) mRNA in the skeletal muscle comparing it with the wild-type mice, which suggests that ROR(alpha) is involved in the regulation of Reverb(alpha) gene expression. Transient transfection assays using the Reverb(alpha) promoter demonstrate that ROR(alpha) regulates the Reverb(alpha) gene at the transcriptional level. Furthermore, mutagenesis experiments indicate that ROR(alpha) regulates Reverb(alpha) transcription via a monomeric ROR response element located in the Reverb(alpha) gene promoter. Electrophoretic mobility shift assays show that ROR(alpha) binds strongly to this site in a specific-manner. Finally, overexpression of GRIP-1/TIF-2, but not SRC-1, potentiates ROR(alpha)-stimulated Reverb(alpha) promoter activity in transient transfection experiments. Together, our results identify Reverb(alpha) as a novel target gene for ROR(alpha).
Insights
Nuclear receptors ROR-alpha and Reverb-alpha are orphan receptors involved in cell differentiation. This study identifies Reverb-alpha as a novel ROR-alpha target gene, demonstrating ROR-alpha regulates Reverb-alpha transcription.
Area of Science:
- Molecular Biology
- Genetics
- Cell Biology
Background:
- The nuclear receptor superfamily regulates critical biological processes.
- ROR-alpha (NR1F1) and Reverb-alpha (NR1D1) are orphan nuclear receptors with largely unknown functions.
- No ligands have been identified for ROR-alpha and Reverb-alpha.
Purpose of the Study:
- To investigate the biological functions and regulatory relationships of ROR-alpha and Reverb-alpha.
- To determine if ROR-alpha regulates Reverb-alpha gene expression.
- To elucidate the mechanism of ROR-alpha-mediated regulation of Reverb-alpha.
Main Methods:
- Northern blot analysis to assess Reverb-alpha expression.
- Reverse transcription-PCR to analyze Reverb-alpha mRNA levels in staggerer mice.
- Transient transfection assays and mutagenesis to study promoter activity.
- Electrophoretic mobility shift assays to confirm ROR-alpha binding.
Main Results:
- ROR-alpha and Reverb-alpha share similar tissue distribution and are induced during myoblast differentiation.
- Ectopic ROR-alpha expression increases Reverb-alpha expression.
- Reverb-alpha mRNA is significantly reduced in staggerer mice skeletal muscle.
- ROR-alpha directly binds to a ROR response element in the Reverb-alpha promoter and regulates its transcription.
- Co-activator GRIP-1/TIF-2 potentiates ROR-alpha activity.
Conclusions:
- Reverb-alpha is identified as a novel target gene of ROR-alpha.
- ROR-alpha plays a significant role in regulating Reverb-alpha gene expression at the transcriptional level.
- These findings contribute to understanding the biological roles of orphan nuclear receptors in cellular processes.