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Chromatin Immunoprecipitation (ChIP) of Histone Modifications from Saccharomyces cerevisiae
Published on: December 29, 2017
The transcriptional repressor Sp3 is associated with CK2-phosphorylated histone deacetylase 2
Jian-Min Sun1, Hou Yu Chen, Mariko Moniwa
1Manitoba Institute of Cell Biology, Winnipeg, Manitoba R3E 0V9, Canada.
Abstract:
Sp1 and Sp3 are ubiquitously expressed mammalian transcription factors that function as activators or repressors. Although both transcription factors share a common domain involved in forming multimers, we demonstrate that Sp1 and Sp3 form separate complexes in estrogen-dependent human breast cancer cells. Sp1 and Sp3 complexes associate with histone deacetylases (HDACs) 1 and 2. Although most HDAC2 is not phosphorylated in the breast cancer cells, HDAC2 bound to Sp1 and Sp3 and cross-linked to chromatin in situ is highly enriched in a phosphorylated form that has a reduced mobility in SDS-polyacrylamide gels. We show that protein kinase CK2 is associated with and phosphorylates HDAC2. Alkaline phosphatase treatment of HDAC2 and Sp1 and Sp3 complexes reduced the associated HDAC activity. Protein kinase CK2 is up-regulated in several cancers including breast cancer, and Sp1 and Sp3 have key roles in estrogen-induced proliferation and gene expression in estrogen-dependent breast cancer cells. CK2 phosphorylation of HDAC2 recruited by Sp1 or Sp3 could regulate HDAC activity and alter the balance of histone deacetylase and histone acetyltransferase activities and dynamic chromatin remodeling of estrogen-regulated genes.
Insights
Sp1 and Sp3 transcription factors form distinct complexes with HDACs in breast cancer cells. Protein kinase CK2 phosphorylates HDAC2, potentially regulating gene expression and chromatin remodeling.
Area of Science:
- Molecular Biology
- Cancer Research
- Epigenetics
Background:
- Sp1 and Sp3 are mammalian transcription factors involved in gene regulation.
- Estrogen signaling drives proliferation and gene expression in breast cancer.
- Histone deacetylases (HDACs) play crucial roles in chromatin remodeling.
Purpose of the Study:
- To investigate the interaction and regulation of Sp1, Sp3, and HDACs in estrogen-dependent breast cancer cells.
- To determine the role of protein kinase CK2 in modifying HDAC activity within these complexes.
Main Methods:
- Co-immunoprecipitation to identify protein complexes.
- Chromatin immunoprecipitation (ChIP) to assess in vivo interactions.
- SDS-PAGE and Western blotting to analyze protein phosphorylation.
- Alkaline phosphatase treatment to assess enzyme activity.
Main Results:
- Sp1 and Sp3 form separate complexes with HDAC1 and HDAC2 in breast cancer cells.
- HDAC2 associated with Sp1/Sp3 and chromatin is phosphorylated.
- Protein kinase CK2 directly phosphorylates HDAC2.
- Phosphorylation of HDAC2 by CK2 reduces associated HDAC activity.
Conclusions:
- CK2-mediated phosphorylation of HDAC2, recruited by Sp1/Sp3, may regulate epigenetic modifications in estrogen-regulated genes.
- This mechanism could influence chromatin dynamics and gene expression in breast cancer.
- Targeting CK2 or its interaction with HDAC2 presents a potential therapeutic strategy.
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