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Updated: Sep 29, 2026

Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation
Published on: May 20, 2020
Structure of the epidermal growth factor receptor kinase domain alone and in complex with a 4-anilinoquinazoline
Jennifer Stamos1, Mark X Sliwkowski, Charles Eigenbrot
1Department of Protein Engineering, Genentech, Inc., South San Francisco, California 94080, USA.
Abstract:
The crystal structure of the kinase domain from the epidermal growth factor receptor (EGFRK) including forty amino acids from the carboxyl-terminal tail has been determined to 2.6-A resolution, both with and without an EGFRK-specific inhibitor currently in Phase III clinical trials as an anti-cancer agent, erlotinib (OSI-774, CP-358,774, Tarceva(TM)). The EGFR family members are distinguished from all other known receptor tyrosine kinases in possessing constitutive kinase activity without a phosphorylation event within their kinase domains. Despite its lack of phosphorylation, we find that the EGFRK activation loop adopts a conformation similar to that of the phosphorylated active form of the kinase domain from the insulin receptor. Surprisingly, key residues of a putative dimerization motif lying between the EGFRK domain and carboxyl-terminal substrate docking sites are found in close contact with the kinase domain. Significant intermolecular contacts involving the carboxyl-terminal tail are discussed with respect to receptor oligomerization.
Insights
The crystal structure of epidermal growth factor receptor kinase (EGFRK) was determined, revealing its unique active conformation without phosphorylation. This study provides insights into EGFRK
Area of Science:
- Structural Biology
- Molecular Biology
- Biochemistry
Background:
- Epidermal growth factor receptor (EGFR) family members are unique receptor tyrosine kinases with constitutive kinase activity.
- Unlike other receptor tyrosine kinases, EGFR does not require phosphorylation within its kinase domain for activity.
Purpose of the Study:
- To determine the crystal structure of the epidermal growth factor receptor kinase (EGFRK) domain.
- To investigate the structural basis of EGFRK's constitutive activity and its interaction with the inhibitor erlotinib.
- To explore the role of the carboxyl-terminal tail in EGFRK structure and function.
Main Methods:
- X-ray crystallography was used to determine the EGFRK crystal structure to 2.6-A resolution.
- The structure was solved both in the presence and absence of the EGFRK-specific inhibitor, erlotinib.
- Analysis of protein-protein interactions and conformational states.
Main Results:
- The EGFRK activation loop adopts a conformation similar to the phosphorylated active form of the insulin receptor kinase domain, despite lacking phosphorylation.
- Key residues of a putative dimerization motif were found in close contact with the kinase domain.
- Significant intermolecular contacts involving the carboxyl-terminal tail were observed, suggesting a role in receptor oligomerization.
Conclusions:
- EGFRK possesses a unique structural mechanism for its constitutive activity.
- The inhibitor erlotinib binds to EGFRK, stabilizing its active conformation.
- The carboxyl-terminal tail plays a crucial role in EGFRK oligomerization and potentially its overall function.
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