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Molecular cloning of the rat IL-13 alpha 2 receptor cDNA and its expression in rat tissues
1Department of Neurosurgery, University of Minnesota Medical School, Minneapolis 55455, USA.
Abstract:
The interleukin 13 alpha 2 receptor (IL-13Ralpha2) is highly expressed in human glioma cells. As a consequence this receptor has been proposed as a potential target for immunotherapeutic approaches for treating brain tumors. In developing animal models that may utilize the IL-13Ralpha2 receptor as an immunotherapeutic target, only the murine gene sequence has thus far been elucidated. The purpose of the present study, therefore, was to determine the gene sequence and tissue distribution of IL-13Ralpha2 in the rat. A search of the NCBI expressed sequence tag (EST) database with human and mouse IL-13Ralpha2 gene sequences identified a rat EST with high homology to the human and mouse IL-13Ralpha2 conserved region. Based on the sequence information, a 1917 bp rat IL-13Ralpha2 cDNA was cloned using the 5' and 3' RACE PCR technique. The cloned rat IL-13Ralpha2 cDNA contains a full-length 1158 bp open reading frame. The deduced protein is 91.2% and 54.2% homologous to mouse and human IL- 13Ralpha2, respectively, at the amino acid level. Analysis shows that the rat IL-13Ralpha2 is structurally conserved and similar to human and mouse. It has a very short cytoplasmic domain, an extracellular domain containing an N-terminal fibronectin type III domain, four putative N-glycosylation sites, and a growth factor and cytokine receptor family motif WSEWS. Using RT-PCR techniques, the mRNA of rat IL-13Ralpha2 was detected in rat brain, spleen, liver, thymus, stomach, testis, and three rat glioblastoma cell lines C6, A15A5 and 9L. The cloning of rat IL-13Ralpha2 may be helpful to establish a rat model for IL-13Ralpha2 related glioma therapies.
Insights
Researchers have identified and sequenced the rat interleukin 13 alpha 2 receptor (IL-13Ralpha2) gene. This discovery is crucial for developing new rat models for glioma immunotherapies targeting IL-13Ralpha2.
Area of Science:
- Neuroscience
- Molecular Biology
- Immunology
Background:
- The interleukin 13 alpha 2 receptor (IL-13Ralpha2) is highly expressed in human glioma cells.
- IL-13Ralpha2 is a potential target for brain tumor immunotherapies.
- Murine gene sequence for IL-13Ralpha2 is known, but rat sequence is not.
Purpose of the Study:
- Determine the gene sequence of rat IL-13Ralpha2.
- Investigate the tissue distribution of rat IL-13Ralpha2.
- Facilitate the development of rat models for IL-13Ralpha2-targeted glioma therapies.
Main Methods:
- NCBI expressed sequence tag (EST) database search for rat IL-13Ralpha2.
- Cloning of rat IL-13Ralpha2 cDNA using 5' and 3' RACE PCR.
- RT-PCR to detect mRNA expression in various rat tissues and cell lines.
Main Results:
- A 1917 bp rat IL-13Ralpha2 cDNA was cloned, containing a 1158 bp open reading frame.
- The deduced rat IL-13Ralpha2 protein shows high homology to mouse and human counterparts.
- Rat IL-13Ralpha2 mRNA was detected in brain, spleen, liver, thymus, stomach, testis, and glioblastoma cell lines (C6, A15A5, 9L).
Conclusions:
- The rat IL-13Ralpha2 gene sequence and its tissue distribution have been characterized.
- The rat IL-13Ralpha2 is structurally conserved and similar to human and mouse orthologs.
- This characterization provides a foundation for establishing rat models for IL-13Ralpha2-targeted glioma immunotherapies.

