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Related Experiment Videos

Expanding pyrimidine diphosphosugar libraries via structure-based nucleotidylyltransferase engineering.

William A Barton1, John B Biggins, Jiqing Jiang

  • 1Cellular Biochemistry and Biophysics Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

Proceedings of the National Academy of Sciences of the United States of America
|October 11, 2002
PubMed
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This study engineered enzymes for glycorandomization, expanding the range of available sugars for creating diverse glycosylated biomolecules. A key mutation enhanced enzyme acceptance of various alpha-d-hexopyranosyl phosphates.

Area of Science:

  • Biochemistry
  • Enzymology
  • Synthetic Biology

Background:

  • In vitro glycorandomization is a chemoenzymatic method for producing diverse glycosylated biomolecules from natural product scaffolds.
  • This technique utilizes engineered enzymes, specifically nucleotidylyltransferases and glycosyltransferases, involved in metabolite glycosylation.

Purpose of the Study:

  • To expand the variety of UDP/dTDP sugars usable in glycorandomization.
  • To engineer Salmonella enterica LT2 alpha-d-glucopyranosyl phosphate thymidylyltransferase (E(p)) to accept a broader range of alpha-d-hexopyranosyl phosphates.

Main Methods:

  • Employed a structure-based engineering approach to modify the enzyme E(p).
  • Investigated the design rationale, substrate specificity, and structural characteristics of engineered mutations.

Related Experiment Videos

  • Utilized X-ray crystallography for structural elucidation of enzyme-substrate interactions.
  • Main Results:

    • Identified three engineered mutations with altered substrate specificities.
    • A single amino acid substitution (L89T) significantly broadened the enzyme's acceptance of alpha-d-hexopyranosyl phosphates, including alpha-d-allo-, alpha-d-altro-, and alpha-d-talopyranosyl phosphate.
    • Demonstrated successful and some unexpected outcomes in altering nucleotidylyltransferase specificity through rational design.

    Conclusions:

    • The study provides a blueprint for rationally altering nucleotidylyltransferase specificity.
    • This engineered enzyme expands the toolkit for in vitro glycorandomization.
    • The findings represent a crucial step towards more versatile chemoenzymatic synthesis of complex carbohydrates.