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Updated: Sep 28, 2026

Experimental Human Pneumococcal Carriage
Published on: February 15, 2013
Detection of Pneumocystis DNA in samples from patients suspected of bacterial pneumonia--a case-control study
Jannik Helweg-Larsen1, Jørgen Skov Jensen, Birthe Dohn
1Copenhagen HIV Programme, Department of Infectious Diseases, Copenhagen, Denmark. jhl@cphiv.dk
Background:
Pneumocystis jiroveci (formerly known as P. carinii f.sp. hominis) is an opportunistic fungus that causes Pneumocystis pneumonia (PCP) in immunocompromised individuals. Pneumocystis jiroveci can be detected by polymerase chain reaction (PCR). To investigate the clinical importance of a positive Pneumocystis-PCR among HIV-uninfected patients suspected of bacterial pneumonia, a retrospective matched case-control study was conducted.
Methods:
Respiratory samples from 367 patients suspected of bacterial pneumonia were analysed by PCR amplification of Pneumocystis jiroveci. To compare clinical factors associated with carriage of P. jiroveci, a case-control study was done. For each PCR-positive case, four PCR-negative controls, randomly chosen from the PCR-negative patients, were matched on sex and date of birth.
Results:
Pneumocystis-DNA was detected in 16 (4.4%) of patients. The median age for PCR-positive patients was higher than PCR-negative patients (74 vs. 62 years, p = 0.011). PCR-positive cases had a higher rate of chronic or severe concomitant illness (15 (94%)) than controls (32 (50%)) (p = 0.004). Twelve (75%) of the 16 PCR positive patients had received corticosteroids, compared to 8 (13%) of the 64 PCR-negative controls (p < 0.001). Detection of Pneumocystis-DNA was associated with a worse prognosis: seven (44%) of patients with positive PCR died within one month compared to nine (14%) of the controls (p = 0.01). None of the nine PCR-positive patients who survived had developed PCP at one year of follow-up.
Conclusions:
Our data suggest that carriage of Pneumocystis jiroveci is associated with old age, concurrent disease and steroid treatment. PCR detection of P. jiroveci has low specificity for diagnosing PCP among patients without established immunodeficiency. Whether overt infection is involved in the poorer prognosis or merely reflects sub-clinical carriage is not clear. Further studies of P. jiroveci in patients receiving systemic treatment with corticosteroids are warranted.
Insights
Pneumocystis jiroveci (PJP) DNA detection in HIV-uninfected patients with suspected bacterial pneumonia is linked to older age, comorbidities, and steroid use. This finding suggests PJP PCR has low specificity for diagnosing PJP pneumonia in non-immunocompromised individuals.
Area of Science:
- Medical Mycology
- Infectious Diseases
- Clinical Microbiology
Background:
- Pneumocystis jiroveci is an opportunistic fungus causing Pneumocystis pneumonia (PCP) in immunocompromised individuals.
- Polymerase chain reaction (PCR) is a method for detecting Pneumocystis jiroveci.
- The clinical significance of positive Pneumocystis-PCR in HIV-uninfected patients with suspected bacterial pneumonia requires investigation.
Purpose of the Study:
- To evaluate the clinical importance of positive Pneumocystis-PCR results in HIV-uninfected patients presenting with symptoms suggestive of bacterial pneumonia.
- To identify clinical factors associated with Pneumocystis jiroveci carriage in this patient population.
Main Methods:
- A retrospective matched case-control study was conducted.
- Respiratory samples from 367 patients suspected of bacterial pneumonia were analyzed using PCR for Pneumocystis jiroveci.
- PCR-positive cases were matched with four PCR-negative controls based on sex and date of birth.
Main Results:
- Pneumocystis-DNA was detected in 4.4% of patients.
- PCR-positive patients were older (median 74 vs. 62 years) and had a higher prevalence of severe concomitant illness (94% vs. 50%).
- Corticosteroid treatment was significantly more common in PCR-positive cases (75% vs. 13%).
- A worse prognosis was observed in PCR-positive patients, with a 30-day mortality rate of 44% compared to 14% in controls.
Conclusions:
- Pneumocystis jiroveci carriage in HIV-uninfected patients is associated with advanced age, concurrent severe diseases, and corticosteroid therapy.
- PCR detection of Pneumocystis jiroveci demonstrates low specificity for diagnosing PCP in patients without known immunodeficiency.
- Further research is needed to clarify whether the poorer prognosis is due to overt infection or subclinical carriage, particularly in patients on systemic corticosteroids.
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