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Updated: Aug 7, 2026

Visualization of UV-induced Replication Intermediates in E. coli using Two-dimensional Agarose-gel Analysis
Published on: December 22, 2010
An ATR- and Chk1-dependent S checkpoint inhibits replicon initiation following UVC-induced DNA damage
Timothy P Heffernan1, Dennis A Simpson, Alexandra R Frank
1Department of Pathology and Laboratory Medicine, Center for Environmental Health and Susceptibility, and Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
Abstract:
Inhibition of replicon initiation is a stereotypic DNA damage response mediated through S checkpoint mechanisms not yet fully understood. Studies were undertaken to elucidate the function of checkpoint proteins in the inhibition of replicon initiation following irradiation with 254 nm UV light (UVC) of diploid human fibroblasts immortalized by the ectopic expression of telomerase. Velocity sedimentation analysis of nascent DNA molecules revealed a 50% inhibition of replicon initiation when normal human fibroblasts were treated with a low dose of UVC (1 J/m(2)). Ataxia telangiectasia (AT), Nijmegen breakage syndrome (NBS), and AT-like disorder fibroblasts, which lack an S checkpoint response when exposed to ionizing radiation, responded normally when exposed to UVC and inhibited replicon initiation. Pretreatment of normal and AT fibroblasts with caffeine or UCN-01, inhibitors of ATR (AT mutated and Rad3 related) and Chk1, respectively, abolished the S checkpoint response to UVC. Moreover, overexpression of kinase-inactive ATR in U2OS cells severely attenuated UVC-induced Chk1 phosphorylation and reversed the UVC-induced inhibition of replicon initiation, as did overexpression of kinase-inactive Chk1. Taken together, these data suggest that the UVC-induced S checkpoint response of inhibition of replicon initiation is mediated by ATR signaling through Chk-1 and is independent of ATM, Nbs1, and Mre11.
Insights
UV radiation triggers a DNA damage response that inhibits DNA replication initiation. This process relies on ATR and Chk1 signaling, independent of ATM, Nbs1, and Mre11 proteins.
Area of Science:
- Cellular biology
- Molecular genetics
- DNA damage response
Background:
- DNA damage response involves checkpoint mechanisms controlling DNA replication.
- The precise role of checkpoint proteins in inhibiting DNA replication initiation after UV damage is not fully understood.
Purpose of the Study:
- To investigate the function of checkpoint proteins in the inhibition of DNA replication initiation following UV irradiation.
- To elucidate the signaling pathways involved in the UV-induced S checkpoint response.
Main Methods:
- UV irradiation (254 nm) of human fibroblasts.
- Velocity sedimentation analysis of nascent DNA.
- Analysis of cells with genetic deficiencies in DNA repair proteins (AT, NBS).
- Inhibition of ATR and Chk1 signaling pathways.
- Overexpression of kinase-inactive ATR and Chk1.
Main Results:
- Low-dose UV irradiation (1 J/m(2)) caused a 50% inhibition of DNA replication initiation in normal human fibroblasts.
- Fibroblasts deficient in ATM or Nbs1 (AT, NBS cells) exhibited normal UV-induced inhibition of replication initiation.
- Inhibitors of ATR and Chk1 abolished the UV-induced S checkpoint response.
- Overexpression of kinase-inactive ATR or Chk1 reversed the UV-induced inhibition of replication initiation.
Conclusions:
- The UV-induced S checkpoint response, leading to inhibition of DNA replication initiation, is mediated by ATR signaling through Chk1.
- This pathway is independent of ATM, Nbs1, and Mre11.
- ATR-Chk1 signaling is crucial for maintaining genomic stability after UV DNA damage.
Related Concept Videos
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S-Cdk Initiates DNA Replication
Two states at the origin of replication
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DNA Damage Can Stall the Cell Cycle
S-Cdk Initiates DNA Replication
Two states at the origin of replication
In eukaryotes, the initiation of replication occurs at many sites on the chromosomes, called the origins of replication.

