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Functionality of two new polymorphisms in the human renin gene enhancer region
Sébastien Fuchs1, Josette Philippe, Stephane Germain
1INSERM Unit 36, Collège de France, 11 place Marcelin Berthelot, 75005 Paris, France. sebastien.fuchs@college-de-france.fr
Journal of Hypertension
|December 11, 2002
Summary
The human renin gene enhancer is larger than previously thought, extending to include a newly identified single nucleotide polymorphism (SNP) at -5312. This SNP variant significantly impacts renin gene transcription levels.
Area of Science:
- Genetics
- Molecular Biology
- Endocrinology
Background:
- Renin production, a key step in the renin-angiotensin system, is regulated by a distal promoter enhancer element in the human gene.
- This 225 bp enhancer element (-5777 to -5552) is crucial for stimulating renin gene expression.
Purpose of the Study:
- To validate the role of the 225 bp enhancer in regulating renin gene transcription.
- To identify genetic variations within this enhancer region and assess their functional impact.
- To elucidate the full extent of the human renin gene enhancer.
Main Methods:
- Decoy experiments using the 225 bp enhancer in human choriodecidual cells to assess promoter activity.
- DNA sequencing of 70 genomic samples to identify single nucleotide polymorphisms (SNPs) in the enhancer region.
- Transfection assays with various promoter constructs containing identified SNPs to measure renin gene transcription.
- Gel mobility shift assays to identify cis-regulatory elements interacting with the -5312 SNP.
Main Results:
- The 225 bp enhancer element significantly inhibited renin gene promoter activity by 95% in decoy experiments.
- Two novel SNPs were identified at positions -5434 and -5312.
- A larger region (592 bp) encompassing the 225 bp enhancer and the -5312 SNP exhibited stronger enhancer activity.
- The -5312T variant showed a 45% increase in transcription levels compared to the -5312C variant; the -5434 variants had no significant effect.
- Specific nuclear protein interactions with the -5312 SNP region were confirmed.
Conclusions:
- The human renin gene enhancer encompasses more than the previously identified 225 bp element.
- The enhancer region extends to include the -5312 SNP, which plays a significant role in modulating renin gene transcription.
- Genetic variations within this extended enhancer region can influence renin production.