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Oligopeptide Competition Assay for Phosphorylation Site Determination
Published on: May 18, 2017
Effects of prenyl pyrophosphates on the binding of PKCgamma with RACK1
Yu-Hsun Chen1, Han-Chung Wang, Ching-Yu Lin
1Division of Biochemistry and Molecular Science, Institute of Zoology, Academia Sinica, Nankang 11529, Taipei, Taiwan.
Abstract:
Receptors for activated C kinase (RACKs) are a group of PKC binding proteins that have been shown to mediate isoform-selective functions of PKC and to be crucial in the translocation and subsequent functioning of the PKC isoenzymes on activation. RACK1 cDNA from the shrimp Penaeus japonicus was isolated by homology cloning. The hepatopancreas cDNA from this shrimp was found to encode a 318-residue polypeptide whose predicted amino acid sequence shared 91% homology with human G(beta2)-like proteins. Expression of the cDNA of shrimp RACK1 in vitro yielded a 45-kDa polypeptide with positive reactivity toward the monoclonal antibodies against RACK1 of mammals. The shrimp RACK1 was biotinylated and used to compare the effects of geranylgeranyl pyrophosphate and farnesyl pyrophosphate on its binding with PKCgamma in anti-biotin-IgG precipitates. PKCgammas were isolated from shrimp eyes and mouse brains. Both enzyme preparations were able to inhibit taxol-induced tubulin polymerization. Interestingly, when either geranylgeranyl pyrophosphate or farnesyl pyrophosphate was reduced to the submicrogram level, the recruitment activity of RACK1 with purified PKCgamma was found to increase dramatically. The activation is especially significant for RACK1 and PKCgamma from different species. The observation implies that the deprivation of prenyl pyrophosphate might function as a signal for RACK1 to switch the binding from the conventional isoenzymes of PKC (cPKC) to the novel isoenzymes of PKC (nPKC). A hydrophobic binding pocket for geranylgeranyl pyrophosphate in RACK1 is further revealed via prenylation with protein geranylgeranyl transferase I of shrimp P. japonicus.
Insights
Receptors for activated C kinase 1 (RACK1) from shrimp bind to PKCgamma, influencing tubulin polymerization. Low levels of prenyl pyrophosphates enhance this RACK1-PKCgamma interaction, suggesting a signaling role in PKC isoform switching.
Area of Science:
- Molecular Biology
- Biochemistry
- Cell Signaling
Background:
- Receptors for activated C kinase (RACKs) are crucial for protein kinase C (PKC) isoenzyme translocation and function.
- RACK1 mediates isoform-selective PKC functions, impacting cellular processes.
- Understanding RACK1 interactions is key to deciphering PKC signaling pathways.
Purpose of the Study:
- To isolate and characterize RACK1 cDNA from the shrimp Penaeus japonicus.
- To investigate the binding interaction between shrimp RACK1 and PKCgamma.
- To explore the role of prenyl pyrophosphates in modulating RACK1-PKCgamma binding and function.
Main Methods:
- Homology cloning was used to isolate RACK1 cDNA from Penaeus japonicus.
- Recombinant shrimp RACK1 was expressed and characterized using monoclonal antibodies.
- Biotinylated shrimp RACK1 was used in co-precipitation assays with purified PKCgamma to assess binding in the presence of geranylgeranyl pyrophosphate and farnesyl pyrophosphate.
Main Results:
- Shrimp RACK1 cDNA encodes a 318-amino acid polypeptide with 91% homology to human G(beta2)-like proteins.
- Expressed shrimp RACK1 produced a 45-kDa polypeptide reactive to anti-RACK1 antibodies.
- Low concentrations of geranylgeranyl pyrophosphate and farnesyl pyrophosphate significantly enhanced RACK1-PKCgamma binding, particularly between species.
- Both shrimp and mouse PKCgamma inhibited taxol-induced tubulin polymerization.
Conclusions:
- Depletion of prenyl pyrophosphates may signal RACK1 to switch binding from conventional PKC (cPKC) to novel PKC (nPKC) isoenzymes.
- A hydrophobic binding pocket for geranylgeranyl pyrophosphate in RACK1 was identified through prenylation.
- Shrimp RACK1 serves as a functional homolog of mammalian RACK1, participating in PKC-mediated cellular processes.
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