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Updated: Aug 11, 2026

Reconstruction of 3-Dimensional Histology Volume and its Application to Study Mouse Mammary Glands
Published on: July 26, 2014
Very high-resolution morphometry using mass-preserving deformations and HAMMER elastic registration
Dinggang Shen1, Christos Davatzikos
1Section of Biomedical Image Analysis, Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Abstract:
This article presents a very high-resolution voxel-based morphometric method, by using a mass-preserving deformation mechanism and a fully automated spatial normalization approach, referred to as HAMMER. By using a hierarchical attribute-based deformation strategy, HAMMER partly overcomes limitations of several existing spatial normalization methods, and it achieves a level of accuracy that makes possible morphometric measurements of spatial specificity close to the voxel dimensions. The proposed method is validated by a series of experiments, with both simulated and real brain images.

