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The RESID Database of Protein Modifications: 2003 developments.

John S Garavelli1

  • 1The EMBL Outstation-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. john.garavelli@ebi.ac.uk

Nucleic Acids Research
|January 10, 2003
PubMed
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The RESID Database offers extensive data on protein modifications, including names, structures, and generating enzymes. This resource aids researchers studying post-translational modifications in proteins.

Area of Science:

  • Biochemistry
  • Proteomics
  • Bioinformatics

Background:

  • Protein modifications are crucial for cellular function.
  • A centralized resource for modification data is needed.

Purpose of the Study:

  • To present the RESID Database as a comprehensive resource for protein modifications.
  • To detail the types of data included in the RESID Database.

Main Methods:

  • Compilation of annotations and structures for protein modifications.
  • Inclusion of systematic and alternate names, formulas, masses, and generating enzymes.
  • Integration of keywords, literature citations, and cross-references to other databases.

Main Results:

  • The RESID Database contains detailed information on pre-, co-, and post-translational modifications.

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  • Includes amino-terminal, carboxyl-terminal, and peptide chain cross-link modifications.
  • Provides structure diagrams and molecular models for modifications.

    • Conclusions:

    • The RESID Database is a valuable, freely accessible resource for researchers.
    • Facilitates the study of protein modifications and their impact on function.