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Updated: Dec 31, 2025

Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis
Published on: June 27, 2020
The contribution of E2F-regulated transcription to Drosophila PCNA gene function
Stephen A Thacker1, Peter C Bonnette, Robert J Duronio
1Program in Molecular Biology, University of North Carolina, 27599, Chapel Hill, NC, USA.
Abstract:
E2F proteins control cell cycle progression by predominantly acting as either activators or repressors of transcription. How the antagonizing activities of different E2Fs are integrated by cis-acting control regions into a final transcriptional output in an intact animal is not well understood. E2F function is required for normal development in many species, but it is not completely clear for which genes E2F-regulated transcription provides an essential biological function. To address these questions, we have characterized the control region of the Drosophila PCNA gene. A single E2F binding site within a 100-bp enhancer is necessary and sufficient to direct the correct spatiotemporal program of G1-S-regulated PCNA expression during development. This dynamic program requires both E2F-mediated transcriptional activation and repression, which, in Drosophila, are thought to be carried out by two distinct E2F proteins. Our data suggest that functional antagonism between these different E2F proteins can occur in vivo by competition for the same binding site. An engineered PCNA gene with mutated E2F binding sites supports a low level of expression that can partially rescue the lethality of PCNA null mutants. Thus, E2F regulation of PCNA is dispensable for viability, but is nonetheless important for normal Drosophila development.
Insights
E2F proteins regulate cell cycle gene expression in Drosophila. Functional antagonism between distinct E2F proteins at a single binding site controls PCNA gene transcription during development.
Area of Science:
- Molecular Biology
- Developmental Biology
- Genetics
Background:
- E2F proteins are key regulators of cell cycle progression, acting as transcriptional activators or repressors.
- The integration of opposing E2F activities by cis-regulatory elements in vivo is not fully understood.
- E2F function is crucial for development, but its essential roles in specific gene regulation remain unclear.
Purpose of the Study:
- To investigate how antagonistic E2F activities are integrated to control gene transcription in vivo.
- To characterize the cis-regulatory control region of the Drosophila PCNA gene.
- To determine the role of E2F-mediated transcription in Drosophila development.
Main Methods:
- Characterization of the Drosophila PCNA gene's control region.
- Analysis of enhancer function using a 100-bp sequence containing an E2F binding site.
- Assessment of PCNA gene expression and organismal viability in engineered mutants.
Main Results:
- A single E2F binding site within a 100-bp enhancer is necessary and sufficient for spatiotemporal G1-S-regulated PCNA expression.
- Dynamic PCNA expression requires both E2F-mediated transcriptional activation and repression.
- Functional antagonism between distinct Drosophila E2F proteins occurs via competition for the same binding site in vivo.
- Mutating E2F binding sites results in low PCNA expression, partially rescuing PCNA null mutant lethality.
Conclusions:
- E2F regulation of PCNA expression involves functional antagonism between different E2F proteins competing for the same binding site.
- While E2F regulation of PCNA is dispensable for Drosophila viability, it is important for normal development.
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