Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

Extended method for adiabatic mode reordering.

Christofer S Tautermann1, Andreas F Voegele, Thomas Loerting

  • 1Institute of General, Inorganic and Theoretical Chemistry, University of Innsbruck, Innrain 52a, A-6020 Innsbruck, Austria.

Journal of Computational Chemistry
|January 28, 2003
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Isotope Effect on the Hydrogen Ordering from Ice V to Ice XIII via a Partially Ordered Intermediate.

The journal of physical chemistry. B·2026
Same author

Dynamics of coalescence in hyperquenched glassy water probed by x-rays.

The Journal of chemical physics·2026
Same author

Engineering of acidic pH-responsive anti-CD3 binding antibodies.

mAbs·2026
Same author

Quantifying Spatially Resolved Hydration Thermodynamics Using Grid Inhomogeneous Solvation Theory [Article v1.0].

Living journal of computational molecular science·2026
Same author

Balancing the extremes for antibody developability: hydrophobic and electrostatic germline framework signatures for CDR-loop compensation.

mAbs·2026
Same author

Acidity changes in glycine and L-histidine buffers, mannitol, and their mixtures after freezing and lyophilization.

International journal of pharmaceutics·2026
Same journal

Electric-Field Effects on Structure and Conductance in a Cytochrome b<sub>562</sub> Junction.

Journal of computational chemistry·2026
Same journal

Quantum Chemistry Study of Luminescence Quenching in the Eu<sup>3+</sup>@UiO-67 Sensor Induced by Ag<sup>+</sup> Ions.

Journal of computational chemistry·2026
Same journal

Projection-Modified Direct Inversion in the Iterative Subspace: A Memory-Efficient Convergence Method for the Extended Molecular Ornstein-Zernike Theory.

Journal of computational chemistry·2026
Same journal

PES2MP: A Python Application for Automating Collisional Dynamics of Linear Rigid-Rotors.

Journal of computational chemistry·2026
Same journal

The Anionic States of Ubiquinone Characterized by Second-Order Approximate Coupled-Cluster Theory.

Journal of computational chemistry·2026
Same journal

Hydrogen Bond Energy Estimation in Large Molecular Clusters via the Method of Synergistic Cyclic Cooperativity: A Software Update H-BEE 2.0.

Journal of computational chemistry·2026
See all related articles

This study presents an improved algorithm for adiabatic mode reordering, crucial for reaction valley studies. The new method reliably resolves frequency crossings using perturbation theory, enhancing computational accuracy.

Area of Science:

  • Computational Chemistry
  • Theoretical Chemistry

Background:

  • Vibrational mode reordering is essential for reaction valley studies and tunneling effect calculations.
  • Existing algorithms, like Konkoli et al.'s, face numerical challenges at frequency crossings.

Purpose of the Study:

  • To develop an extended adiabatic mode reordering algorithm.
  • To address and overcome numerical instabilities in previous methods, particularly at frequency crossings.

Main Methods:

  • Utilizing cubic splines for interpolating force constant matrices to enable larger step sizes.
  • Employing perturbation theory to accurately resolve frequency crossings and avoided crossings.

Main Results:

  • The enhanced algorithm demonstrates reliable resolution of mode crossings and avoided crossings, irrespective of system symmetry.

Related Experiment Videos

  • Larger step sizes are feasible along the minimum energy path, improving computational efficiency.
  • The limitations of the maximal overlap method at nearby eigenvalues are theoretically explained.
  • Conclusions:

    • The new perturbative procedure offers a more robust solution for adiabatic mode reordering.
    • Caution is advised when handling eigenvectors associated with nearby eigenvalues in computational chemistry.
    • This advancement improves the accuracy and efficiency of vibrational analysis in chemical reaction studies.