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Quantitative Real-Time PCR Evaluation of microRNA Expressions in Mouse Kidney with Unilateral Ureteral Obstruction
Published on: August 27, 2020
Effects of oral adsorbent on gene expression profile in uremic rat kidney: cDNA array analysis
Isao Aoyama1, Atsushi Enomoto, Toshimitsu Niwa
1Nagoya University Hospital, Nagoya, Japan.
Background:
An oral adsorbent, AST-120, is effective in removing such uremic toxins as indoxyl sulfate and delays the progression of chronic renal failure. To elucidate the molecular mechanisms underlying the renoprotective effects of AST-120, the complementary DNA (cDNA) array method was used to survey the alteration in gene expression profiles of uremic rat kidneys in response to AST-120.
Methods:
Six weeks after five-sixth nephrectomy, 10 uremic rats were divided into two groups: those administered AST-120 and control uremic rats. Rats subjected to sham operation also were included as normal rats. After administration of AST-120 for 18 weeks, renal tissues were analyzed by cDNA array.
Results:
Among the 343 genes selected as expressed, control uremic rats showed significantly increased levels of 139 genes and significantly decreased levels of 45 genes compared with normal rats. AST-120 treatment attenuated expression levels of 43 of the 139 upregulated renal genes and 21 of the 45 downregulated renal genes in uremic rat kidney. Those genes could be subdivided into several functional categories, including cytokine (transforming growth factor-beta1 [TGF-beta1], etc), intracellular signaling, transcription, translation, channel and transporter (organic anion transporter 1 [OAT1], etc), metabolism, and protease and its inhibitor. Quantitative reverse-transcriptase polymerase chain reaction (RT-PCR) analysis showed that AST-120 significantly increased OAT1 renal expression and tended to decrease TGF-beta1, tissue inhibitor of metalloproteinase-1 (TIMP-1), and endothelin-1 renal expression in uremic rats. There were statistically significant positive correlations between cDNA array-based and RT-PCR-based gene expression levels of TGF-beta1, TIMP-1, and endothelin-1.
Conclusion:
The cDNA array method determines changes in the gene expression profile in uremic rat kidney in response to AST-120 and provides new insights into elucidation of the molecular mechanism underlying the renoprotective effects of AST-120.
Insights
AST-120, an oral adsorbent, helps protect kidneys by altering gene expression in uremic rats. It modifies levels of key genes involved in inflammation and toxin transport, offering insights into its renoprotective mechanisms.
Area of Science:
- Nephrology and Molecular Biology
- Genomics and Proteomics
Background:
- AST-120 is an oral adsorbent that removes uremic toxins like indoxyl sulfate, slowing chronic renal failure progression.
- Understanding AST-120's renoprotective molecular mechanisms is crucial for developing effective kidney disease treatments.
Purpose of the Study:
- To investigate the molecular mechanisms underlying AST-120's renoprotective effects.
- To analyze alterations in gene expression profiles in uremic rat kidneys treated with AST-120.
Main Methods:
- Uremic rat model created via five-sixth nephrectomy.
- Administration of AST-120 for 18 weeks, followed by renal tissue analysis using complementary DNA (cDNA) array.
- Quantitative reverse-transcriptase polymerase chain reaction (RT-PCR) for validating gene expression changes.
Main Results:
- AST-120 treatment modulated the expression of numerous genes in uremic rat kidneys, including those related to cytokines (e.g., TGF-beta1), transporters (e.g., OAT1), and proteases.
- AST-120 significantly increased organic anion transporter 1 (OAT1) expression.
- AST-120 tended to decrease the expression of transforming growth factor-beta1 (TGF-beta1), tissue inhibitor of metalloproteinase-1 (TIMP-1), and endothelin-1.
Conclusions:
- The cDNA array method effectively identified gene expression profile changes in response to AST-120 in uremic rat kidneys.
- These findings provide new insights into the molecular mechanisms of AST-120's renoprotective effects.
- Further research can leverage these findings to optimize kidney disease management strategies.
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