A naturally occurring mutation in an ATP-binding domain of the recombination repair gene XRCC3 ablates its function

Saeed Rafii1, Annika Lindblom, Malcolm Reed

  • 1Institute for Cancer Studies, Division of Genomic Medicine, University of Sheffield Medical School, Beech Hill Road, Sheffield, S10 2RX, UK.

Insights

Investigating DNA repair genes, researchers found a novel XRCC3 variant (D213N) that impairs function but shows no link to increased cancer risk in healthy individuals or cancer patients. Not all homologous recombination repair genes may be cancer susceptibility genes.

Area of Science:

  • Genetics
  • Molecular Biology
  • Cancer Research

Background:

  • Inherited mutations in BRCA1 and BRCA2 genes are linked to dominant cancer susceptibility.
  • These genes are crucial for the homology-directed DNA repair pathway.
  • The study explores if other DNA repair pathway genes also influence cancer susceptibility.

Purpose of the Study:

  • To investigate whether mutations in other genes involved in the homology-directed DNA repair pathway can affect cancer susceptibility.
  • To identify and characterize novel variants in the XRCC3 gene, a component of this pathway.

Main Methods:

  • Sequencing of the XRCC3 gene to identify novel non-synonymous substitutions.
  • Functional analysis of a specific variant (D213N) in XRCC3-deficient cells.
  • Genotyping of healthy individuals and cancer patient cohorts for the presence of the D213N variant.

Main Results:

  • Three novel non-synonymous substitutions were identified in the XRCC3 gene.
  • The D213N variant, located in a conserved ATP-binding domain, completely abolished the DNA repair function in XRCC3-deficient cells.
  • The D213N variant was found in 3 out of 1577 healthy individuals but was not detected in 187 breast cancer families or 1300 unselected cancer patients.

Conclusions:

  • The study found no evidence that the XRCC3 D213N variant increases cancer risk.
  • The findings suggest that not all components of the homologous recombination repair complex may function as cancer susceptibility genes.

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