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Restriction-modification system in bacteriophage MB78
Deepti Chaturvedi1, Maharani Chakravorty
1Molecular Biology Unit, Institute of Medical Sciences, Banaras Hindu University, Varanasi 221005, India.
Abstract:
Restriction-modification system is present in bacteria to protect the cells against phage infection. Interestingly, the bacteriophage MB78, a virulent phage of Salmonella typhimurium possesses restriction-modification system. Permissive host transformed with plasmid having the genomic fragment of MB78 carrying the putative restriction-modification genes severely restrict the growth of the phage 9NA. Growth of phage MB78 is also restricted to some extent. However, the temperate phage P22 is not restricted at all. Cloning of the the putative restriction-modification genes has been done in both orientations in different vectors. The clones carrying the genes in the same orientation as that of the lacZ in pUC19 are mostly unstable. However, those are stable when cloned in opposite orientation. Viability of the transformants is strain-, orientation-, and medium-dependent. The two genes have also been cloned individually/separately. Hosts carrying only the modification gene do not restrict growth of phages while the hosts carrying only the restriction gene do. The former produces stable transformants while the latter produces very unstable transformants which were viable only upto 36 h or so. The colonies carrying modification gene were normal looking while those carrying the restriction gene were tiny, flat, and looked distressed resembling very much the clones carrying bacterial restriction-modification system. Amplification of the genes and subsequent cloning in expression vector will be carried out for characterization of the enzymes.
Insights
The bacteriophage MB78
Area of Science:
- Bacteriophage biology
- Molecular genetics
- Bacterial defense mechanisms
Background:
- Bacteria utilize restriction-modification (R-M) systems for defense against phage infections.
- The virulent bacteriophage MB78 of Salmonella typhimurium harbors its own R-M system.
- Understanding phage R-M systems offers insights into host-phage interactions.
Purpose of the Study:
- To investigate the functional role of the putative R-M genes from bacteriophage MB78.
- To analyze the impact of these genes on phage propagation and host cell viability.
- To characterize the stability and expression of cloned MB78 R-M genes.
Main Methods:
- Cloning of MB78 R-M genes in various orientations and vectors.
- Transformation of permissive hosts with recombinant plasmids.
- Assessing phage restriction against 9NA, MB78, and P22.
- Evaluating transformant stability and viability under different conditions.
- Individual cloning and analysis of restriction and modification genes.
Main Results:
- Expression of MB78 R-M genes in a permissive host restricted growth of phages 9NA and MB78, but not P22.
- Cloning orientation significantly impacted plasmid stability, with opposite orientations to lacZ in pUC19 yielding stable clones.
- Transformant viability was dependent on bacterial strain, gene orientation, and growth medium.
- Hosts expressing only the modification gene showed no phage restriction and stable transformants.
- Hosts expressing only the restriction gene exhibited severe growth restriction and unstable, short-lived transformants.
Conclusions:
- The MB78 R-M system confers a self-defense mechanism against specific phages.
- The cloned restriction gene is toxic to the host, leading to instability and poor viability.
- The MB78 R-M genes represent a novel target for studying phage-host interactions and developing new genetic tools.
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