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Related Experiment Videos

Noise in eukaryotic gene expression.

William J Blake1, Mads KAErn, Charles R Cantor

  • 1Center for BioDynamics, Center for Advanced Biotechnology, Bioinformatics Program, and Department of Biomedical Engineering, Boston University, 44 Cummington Street, Boston, Massachusetts 02215, USA.

Nature
|April 11, 2003
PubMed
Summary
This summary is machine-generated.

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Eukaryotic gene expression is noisy, with transcription driving cell-to-cell variability. This transcriptional noise, unlike in prokaryotes, can be controlled at the translational level and impacts cellular differentiation.

Area of Science:

  • Molecular Biology
  • Systems Biology
  • Genetics

Background:

  • Gene expression in eukaryotes is quantal and probabilistic, leading to cell heterogeneity.
  • Stochasticity in gene expression is a key factor in individual cell responses to stimuli.
  • Understanding noise sources is crucial for explaining cellular variability.

Purpose of the Study:

  • To investigate the contribution of transcriptional stochasticity to cell-cell heterogeneity in eukaryotes.
  • To determine if transcriptional noise can be modulated at the translational level.
  • To explore the role of noise in gene regulatory networks and cellular differentiation.

Main Methods:

  • Utilized a stochastic model of eukaryotic transcription initiation.
  • Analyzed pulsatile messenger RNA (mRNA) production and reinitiation.

Related Experiment Videos

  • Studied noise propagation in a gene cascade network.
  • Conducted experimental validation in Saccharomyces cerevisiae.
  • Main Results:

    • Transcriptional stochasticity significantly contributes to eukaryotic cell-cell heterogeneity, differing from prokaryotes.
    • Pulsatile mRNA production via reinitiation is critical for noise dependence on transcriptional efficiency.
    • Noise can be modulated at the translational level.
    • Increased transcriptional noise in regulatory proteins amplifies cell-cell variability and prolongs bistable expression states.

    Conclusions:

    • Transcriptional noise is a major driver of heterogeneity in eukaryotic clonal populations.
    • Eukaryotic noise mechanisms, particularly pulsatile transcription, differ fundamentally from prokaryotes.
    • Modulating noise at the translational level offers a control mechanism.
    • Transcriptional noise plays a significant role in phenotypic variation and cellular differentiation processes.