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Recognition of DNA modified by antitumor cisplatin by "latent" and "active" protein p53
Miroslav Fojta1, Hana Pivonkova, Marie Brazdova
1Laboratory of Biophysical Chemistry and Molecular Oncology, Institute of Biophysics, Academy of Sciences of the Czech Republic, Kralovopolska 135, 612 65, Brno, Czech Republic. fojta@ibp.cz
Abstract:
Tumor suppressor protein p53 possesses two DNA-binding sites. One that is located within its core domain is responsible for sequence-specific DNA binding of the protein, non-specific binding to internal segments of single- or double-stranded DNA, and to certain kinds of non-B DNA structures. The other that is contained in the C-terminus of the protein binds to damaged DNA. Binding of active, latent, and in vitro-activated p53 protein to DNA fragments modified by antitumor cisplatin was studied using electrophoretic mobility shift assay in agarose gels and immunoblotting analysis. We found that both latent and active p53 forms bound to random sequences of DNA globally modified by cisplatin with a higher affinity than to unmodified DNA. Interestingly, the latent form exhibited a more pronounced selectivity for platinated DNA than the active p53. Consistently with this observation, the preference of the latent form for platinated DNA decreased as a consequence of the activation of latent p53 by phosphorylation at the protein kinase C site within its C-terminus or by binding of the monoclonal antibody Bp53-10.1. Competition experiments involving a 20-bp consensus sequence of p53 suggested that the p53 core domain was a primary binding site of the active p53 when it bound to DNA fragments lacking consensus sequence, but modified by cisplatin. In addition, the latent protein was found to selectively interact with DNA modified by cisplatin probably via its C-terminus.
Insights
The tumor suppressor protein p53 binds to DNA, with distinct sites for general and damaged DNA. Latent p53 shows higher selectivity for cisplatin-modified DNA than active p53.
Area of Science:
- Molecular Biology
- Biochemistry
- Cancer Research
Background:
- The tumor suppressor protein p53 has two DNA-binding domains.
- One domain binds specific DNA sequences, while the other interacts with damaged DNA.
- Understanding p53's interaction with DNA modified by anticancer drugs is crucial.
Purpose of the Study:
- To investigate the binding of active and latent p53 protein to DNA modified by cisplatin.
- To compare the binding affinities and selectivities of different p53 forms to platinated DNA.
Main Methods:
- Electrophoretic mobility shift assay (EMSA) in agarose gels.
- Immunoblotting analysis.
- Competition experiments using p53 consensus DNA sequences.
Main Results:
- Both latent and active p53 forms bound modified DNA with higher affinity than unmodified DNA.
- Latent p53 exhibited greater selectivity for cisplatin-modified DNA compared to active p53.
- Activation of latent p53 reduced its preference for platinated DNA.
Conclusions:
- The C-terminus of p53 likely mediates selective binding to cisplatin-modified DNA in its latent form.
- The core domain of p53 is a primary binding site for active p53 on modified DNA lacking consensus sequences.
- p53's differential DNA binding properties are influenced by its activation state and specific DNA modifications.