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Updated: Sep 26, 2026

Examination of Proteins Bound to Nascent DNA in Mammalian Cells Using BrdU-ChIP-Slot-Western Technique
Published on: January 14, 2016
Fas-associated death domain protein interacts with methyl-CpG binding domain protein 4: a potential link between
Robert A Screaton1, Stephan Kiessling, Owen J Sansom
1The Burnham Institute, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA.
Abstract:
Fas-associated death domain protein (FADD) is an adaptor protein bridging death receptors with initiator caspases. Thus, its function and localization are assumed to be cytoplasmic, although the localization of endogenous FADD has not been reported. Surprisingly, the data presented here demonstrate that FADD is mainly nuclear in several adherent cell lines. Its accumulation in the nucleus and export to the cytoplasm required the phosphorylation site Ser-194, which was also required for its interaction with the nucleocytoplasmic shuttling protein exportin-5. Within the nucleus, FADD interacted with the methyl-CpG binding domain protein 4 (MBD4), which excises thymine from GT mismatches in methylated regions of chromatin. The MBD4-interacting mismatch repair factor MLH1 was also found in a complex with FADD. The FADD-MBD4 interaction involved the death effector domain of FADD and a region of MBD4 adjacent to the glycosylase domain. The FADD-binding region of MBD4 was downstream of a frameshift mutation that occurs in a significant fraction of human colorectal carcinomas. Consistent with the idea that MBD4 can signal to an apoptotic effector, MBD4 regulated DNA damage-, Fas ligand-, and cell detachment-induced apoptosis. The nuclear localization of FADD and its interaction with a genome surveillance/DNA repair protein that can regulate apoptosis suggests a novel function of FADD distinct from direct participation in death receptor signaling complexes.
Insights
Fas-associated death domain protein (FADD) is surprisingly found in the nucleus, not cytoplasm. This nuclear FADD interacts with DNA repair proteins and influences apoptosis, suggesting a new role beyond traditional death receptor signaling.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Fas-associated death domain protein (FADD) is known as a cytoplasmic adaptor protein linking death receptors to initiator caspases.
- The subcellular localization and nuclear functions of endogenous FADD have not been previously reported.
Purpose of the Study:
- To investigate the localization of endogenous FADD within cells.
- To identify potential nuclear binding partners of FADD.
- To elucidate novel functions of FADD beyond its canonical role in death receptor signaling.
Main Methods:
- Immunofluorescence microscopy to determine FADD localization in various adherent cell lines.
- Co-immunoprecipitation assays to identify FADD interacting proteins.
- Analysis of FADD phosphorylation site mutants and their interaction with exportin-5.
- Assessment of MBD4-mediated apoptosis regulation.
Main Results:
- Endogenous FADD is predominantly localized in the nucleus of several adherent cell lines.
- Nuclear accumulation and cytoplasmic export of FADD depend on phosphorylation at Ser-194 and interaction with exportin-5.
- FADD interacts with methyl-CpG binding domain protein 4 (MBD4), a DNA repair protein, and MLH1 within the nucleus.
- MBD4, in complex with FADD, regulates apoptosis induced by DNA damage, Fas ligand, and cell detachment.
Conclusions:
- FADD exhibits a predominantly nuclear localization, challenging its established cytoplasmic role.
- Nuclear FADD interacts with the DNA repair protein MBD4, suggesting a novel function in genome surveillance and DNA repair-associated apoptosis.
- This discovery reveals a new paradigm for FADD function, extending beyond its classical involvement in death receptor-mediated apoptosis pathways.
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