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Affinity Purification of Influenza Virus Ribonucleoprotein Complexes from the Chromatin of Infected Cells
Published on: June 3, 2012
Threonine 157 of influenza virus PA polymerase subunit modulates RNA replication in infectious viruses
Maite Huarte1, Ana Falcón, Yuri Nakaya
1Centro Nacional de Biotecnología, Cantoblanco, 28049 Madrid, Spain.
Abstract:
Previous results have shown a correlation between the decrease in protease activity of several influenza A virus PA protein mutants and the capacity to replicate of the corresponding mutant ribonucleoproteins (RNPs) reconstituted in vivo. In this work we studied the phenotype of mutant viruses containing these mutations. Viruses with a T162A mutation, which showed a very moderate decrease both in protease and replication activities of reconstituted RNPs, showed a wild-type phenotype. Viruses with a T157A mutation, which presented a severe decrease in protease activity and replication of RNPs, showed a complex phenotype: (i) transport to the nucleus of PAT157A protein was delayed, (ii) virus multiplication was reduced at both low and high multiplicities, (iii) transcriptive synthesis was unaltered while replicative synthesis, especially cRNA, was diminished, and (iv) viral pathogenesis in mice was reduced, as measured by loss of body weight and virus titers in lungs. Finally, recombinant viruses with a T157E mutation in PA protein, which resulted in a drastic reduction of protease and replication activities of RNPs, were not viable. These results indicate that residue T157 in PA protein is important for the capacity of viral polymerase to synthesize cRNA.
Insights
Influenza A virus PA protein residue T157 is crucial for viral polymerase function. Mutations here severely impair viral replication, cRNA synthesis, and pathogenesis, with some mutations rendering the virus non-viable.
Area of Science:
- Virology
- Molecular Biology
- Biochemistry
Background:
- Influenza A virus PA protein possesses protease activity linked to viral replication.
- Previous studies indicated a correlation between decreased PA protease activity and reduced viral ribonucleoprotein (RNP) replication capacity.
Purpose of the Study:
- To investigate the in vivo phenotype of influenza A virus PA protein mutants.
- To determine the role of specific PA protein residues (T162 and T157) in viral replication, nuclear transport, and pathogenesis.
Main Methods:
- Generation and characterization of mutant influenza A viruses with specific PA protein mutations (T162A, T157A, T157E).
- Assessment of viral RNP protease and replication activities in vitro.
- Analysis of viral protein nuclear transport, virus multiplication, RNA synthesis (cRNA and mRNA), and viral pathogenesis in a mouse model.
Main Results:
- The T162A mutation showed a wild-type phenotype with moderate effects on protease and RNP replication.
- The T157A mutation resulted in delayed nuclear transport of PA protein, reduced virus multiplication, diminished replicative synthesis (especially cRNA), and decreased viral pathogenesis.
- Recombinant viruses with the T157E mutation were non-viable, indicating a critical role for this residue.
Conclusions:
- Influenza A virus PA protein residue T157 is essential for viral polymerase activity, particularly for cRNA synthesis.
- The T157A mutation significantly impacts multiple stages of the viral life cycle and pathogenesis.
- Severe impairment of PA protein protease and replication activities leads to non-viable influenza A viruses.
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