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Published on: September 7, 2017
[Prokaryotic DNA methyltransferases: the structure and the mechanism of interaction with DNA]
1Chemical Department, Moscow State University, Moscow, 119992 Russia. gromova@genebee.msu.ru
Abstract:
The review considers current views on the function of DNA methyltransferases (MTases) that belong to prokaryotic type II restriction-modification systems. A commonly accepted classification of MTases is described along with their primary and tertiary structures and molecular mechanisms of their specific interaction with DNA (including methylation). MTase inhibitors are also considered. Special emphasis is placed on the flipping of the target heterocyclic base out of the double helix and on the methods employed in its analysis. Base flipping is a fundamentally new type of DNA conformational changes and is also of importance in the case of other DNA-operating enzymes. MTases show unique sequence homology, and are similar in structure of functional centers and in the mechanism of methylation. These data contribute to the understanding of the general biological significance of methylation, since prokaryotic and eukaryotic MTases are structurally and functionally similar.
Insights
DNA methyltransferases (MTases) in prokaryotic systems are reviewed, detailing their structure, function, and base-flipping mechanism. Similarities between prokaryotic and eukaryotic MTases highlight the broad biological significance of DNA methylation.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Context:
- Focuses on prokaryotic type II restriction-modification systems.
- Examines DNA methyltransferases (MTases).
Purpose:
- To review current understanding of MTase function, structure, and mechanisms.
- To highlight the base-flipping mechanism in DNA-protein interactions.
Summary:
- Discusses MTase classification, structural features, and molecular mechanisms of DNA interaction and methylation.
- Emphasizes the unique base-flipping process and its analytical methods.
- Compares prokaryotic and eukaryotic MTases, noting structural and functional similarities.
Impact:
- Enhances understanding of DNA methylation's biological significance.
- Provides insights into DNA-modifying enzymes and their mechanisms.
- Informs the development of MTase inhibitors.
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