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Published on: October 27, 2011
The integral membrane protein p16.7 organizes in vivo phi29 DNA replication through interaction with both the
Alejandro Serna-Rico1, Daniel Muñoz-Espín, Laurentino Villar
1Instituto de Biología Molecular 'Eladio Viñuela' (CSIC), Centro de Biología Molecular 'Severo Ochoa' (CSIC-UAM), Universidad Autónoma, Canto Blanco, 28049 Madrid, Spain.
Abstract:
Remarkably little is known about the in vivo organization of membrane-associated prokaryotic DNA replication or the proteins involved. We have studied this fundamental process using the Bacillus subtilis phage phi29 as a model system. Previously, we demonstrated that the phi29-encoded dimeric integral membrane protein p16.7 binds to ssDNA and is involved in the organization of membrane-associated phi29 DNA replication. Here we demonstrate that p16.7 forms multimers, both in vitro and in vivo, and interacts with the phi29 terminal protein. In addition, we show that in vitro multimerization is enhanced in the presence of ssDNA and that the C-terminal region of p16.7 is required for multimerization but not for ssDNA binding or interaction with the terminal protein. Moreover, we provide evidence that the ability of p16.7 to form multimers is crucial for its ssDNA-binding mode. These and previous results indicate that p16.7 encompasses four distinct modules. An integrated model of the structural and functional domains of p16.7 in relation to the organization of in vivo phi29 DNA replication is presented.
Insights
The Bacillus subtilis phage phi29 protein p16.7 forms multimers, crucial for its DNA binding during membrane-associated replication. This study reveals key structural and functional insights into prokaryotic DNA replication organization.
Area of Science:
- Molecular Biology
- Virology
- Cellular Biology
Background:
- Prokaryotic DNA replication, particularly membrane-associated processes, remains poorly understood.
- The Bacillus subtilis phage phi29 system offers a model for studying these mechanisms.
- The phi29-encoded integral membrane protein p16.7 was previously identified as a ssDNA binder involved in replication organization.
Purpose of the Study:
- To investigate the multimerization properties of the phi29 p16.7 protein.
- To elucidate the role of p16.7 multimerization in its interaction with DNA and other viral proteins.
- To develop a model for the in vivo organization of membrane-associated phi29 DNA replication.
Main Methods:
- In vitro and in vivo multimerization assays of p16.7.
- Analysis of p16.7 interactions with single-stranded DNA (ssDNA) and the phi29 terminal protein.
- Site-directed mutagenesis to identify regions involved in multimerization.
Main Results:
- p16.7 forms multimers both in vitro and in vivo.
- Multimerization is enhanced by the presence of ssDNA.
- The C-terminal region of p16.7 is essential for multimerization but not for ssDNA binding or terminal protein interaction.
- p16.7 multimerization is critical for its ssDNA-binding mode.
Conclusions:
- p16.7 functions as a multimeric protein in phi29 DNA replication.
- The protein possesses distinct functional modules, including those for multimerization, ssDNA binding, and terminal protein interaction.
- A model is proposed integrating p16.7's structure and function in organizing membrane-associated viral DNA replication.
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