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Purified promyelocytic leukemia coiled-coil aggregates as a tetramer displaying low alpha-helical content
Francesco Antolini1, Mario Lo Bello, Marco Sette
1Department of Internal Medicine, Applied Biochemistry and Clinical Chemistry section, Via del Giochetto s.n.c., 06100 Perugia, Italy. francesco.antolini@brindisi.enea.it
Abstract:
The promyelocytic leukemia (PML) gene is involved in the 15/17 chromosomal translocation of acute promyelocytic leukemia (APL). It encodes a nuclear phosphoprotein containing an alpha-helical coiled-coil domain with four heptad repeats. The heptad repeats consist of four clusters of hydrophobic amino acids that mediate in vivo the complex formation between PML and other PML molecules or PML-RARalpha mutant protein. In this report, we show the production of PML coiled-coil (fragment 223-360) as a fusion protein, its solubilization by the combined action of two different detergents, and its purification with affinity chromatography after column proteolytic cleavage. The FPLC chromatograms of the purified coiled-coils, carried out under non-denaturing conditions, show that the peptide elutes only in the presence of Sarkosyl detergent (conc. 0.1%) and, under these conditions, elutes as a tetrameric complex. This confirms the evidence from in vivo experiments that this region is responsible for protein complex formation. The HPLC analyses show the presence of a single peak eluting under highly hydrophobic conditions, indicating the high hydrophobicity of the peptide in accordance with the primary sequence analysis. Finally, the purified peptide was structurally characterized by means of circular dichroism (CD) measurements that were carried out with low Sarkosyl concentration (0.003%). The CD spectra indicate a low alpha-helical content (13.5%) with respect to predictions based on the primary sequence analysis (PSI-PRED, SS-PRO, and J-PRED), suggesting that the alpha-helix content could be modulated by coiled-coil surrounding domains and/or by other post-translational modifications, even if the effect of the Sarkosyl on the peptide secondary structure cannot be excluded.
Insights
The promyelocytic leukemia (PML) coiled-coil domain mediates protein complex formation, as demonstrated by producing and purifying a PML fragment. This fragment self-assembles into a tetrameric complex, confirming its role in PML protein interactions.
Area of Science:
- Molecular Biology
- Protein Biochemistry
Background:
- The promyelocytic leukemia (PML) gene is crucial in acute promyelocytic leukemia (APL) due to the 15/17 chromosomal translocation.
- PML protein contains an alpha-helical coiled-coil domain with heptad repeats responsible for protein-protein interactions.
Purpose of the Study:
- To produce and purify the PML coiled-coil domain (fragment 223-360) as a fusion protein.
- To investigate the self-assembly properties and structural characteristics of the purified PML coiled-coil fragment.
Main Methods:
- Production of PML coiled-coil fragment as a fusion protein.
- Solubilization using detergents and purification via affinity chromatography.
- Analysis of complex formation using FPLC under non-denaturing conditions.
- Characterization of hydrophobicity using HPLC.
- Structural analysis using circular dichroism (CD) spectroscopy.
Main Results:
- The purified PML coiled-coil fragment elutes as a tetrameric complex in the presence of 0.1% Sarkosyl, confirming its ability to form stable complexes.
- HPLC analysis revealed a single peak under hydrophobic conditions, indicating high peptide hydrophobicity.
- CD spectra showed a low alpha-helical content (13.5%), which was lower than predicted, suggesting potential modulation by surrounding domains or post-translational modifications, though detergent effects were noted.
Conclusions:
- The PML coiled-coil domain (fragment 223-360) is responsible for mediating protein complex formation, likely as a tetramer.
- The secondary structure and alpha-helical content of the PML coiled-coil domain may be influenced by factors beyond its primary sequence, including interactions with other domains and post-translational modifications.