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Folding at the speed limit.

Wei Yuan Yang1, Martin Gruebele

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This summary is machine-generated.

Protein folding speed limits were explored using rapidly folding mutants. The study reveals a molecular timescale, crucial for understanding protein folding dynamics and setting ultimate folding speed limits.

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Area of Science:

  • Biophysics
  • Chemical Kinetics
  • Protein Dynamics

Background:

  • Conventional models assume rapid equilibrium in protein folding kinetics.
  • These models may not apply when molecular timescales are significant.
  • The molecular timescale governs the ultimate speed of protein folding.

Purpose of the Study:

  • To directly probe the molecular timescale in protein folding.
  • To investigate the folding dynamics of rapidly folding protein mutants.
  • To determine the ultimate speed limit of protein folding.

Main Methods:

  • Studied rapidly folding mutants of the lambda(6-85) five-helix bundle protein.
  • Measured time-dependent rate coefficients during protein folding.
  • Utilized transition-state theory and chemical kinetics principles.

Main Results:

  • Identified a time-dependent rate coefficient below 2 microseconds.
  • This coefficient signals the onset of the molecular timescale.
  • The molecular timescale was found to be a significant factor in folding dynamics.

Conclusions:

  • The molecular timescale is experimentally accessible and dictates folding speed limits.
  • A simple model confirms the molecular timescale as a natural pre-factor in transition-state models.
  • Findings refine our understanding of protein folding kinetics and dynamics.