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A High Resolution Method to Monitor Phosphorylation-dependent Activation of IRF3
Published on: January 24, 2016
Interferon regulatory factor-2 regulates cell growth through its acetylation
Atsuko Masumi1, Yoshio Yamakawa, Hidesuke Fukazawa
1Department of Safety Research on Biologics, National Institute of Infectious Diseases, Tokyo, Japan. amasumi@nih.go.jp
Abstract:
We have previously shown that interferon regulatory factor-2 (IRF-2) is acetylated by p300 and PCAF in vivo and in vitro. In this study we identified, by mass spectrometry, two lysine residues in the DNA binding domain (DBD), Lys-75 and Lys-78, to be the major acetylation sites in IRF-2. Although acetylation of IRF-2 did not alter DNA binding activity in vitro, mutation of Lys-75 diminished the IRF-2-dependent activation of histone H4 promoter activity. Acetylation of IRF-2 and IRF-2-stimulated H4 promoter activity were inhibited by the adenovirus E1A, indicating the involvement of p300/CBP. Mutation of Lys-78, a residue conserved throughout the IRF family members, led to the abrogation of DNA binding activity independently of acetylation. H4 is transcribed only in rapidly growing cells and its promoter activity is dependent on cell growth. Consistent with a role for acetylated IRF-2 in cell growth control, IRF-2 was acetylated only in growing NIH 3T3 cells, but not in growth-arrested counterparts. Chromatin immunoprecipitation assays showed that IRF-2 interacted with p300 and bound to the endogenous H4 promoter only in growing cells, although the levels of total IRF-2 were comparable in both growing and growth-arrested cells. These results indicate that IRF-2 is acetylated in a cell growth-dependent manner, which enables it to contribute to transcription of cell growth-regulated promoters.
Insights
Interferon regulatory factor-2 (IRF-2) acetylation at Lys-75 is crucial for histone H4 promoter activity in growing cells. This acetylation links IRF-2 to cell growth control.
Area of Science:
- Molecular Biology
- Cellular Biology
- Epigenetics
Background:
- Interferon regulatory factor-2 (IRF-2) is known to be acetylated by p300 and PCAF.
- Acetylation is a key post-translational modification regulating protein function.
Purpose of the Study:
- To identify the specific acetylation sites on IRF-2.
- To investigate the functional consequences of IRF-2 acetylation on DNA binding and transcriptional activity.
- To determine the role of IRF-2 acetylation in cell growth regulation.
Main Methods:
- Mass spectrometry to identify acetylation sites.
- Site-directed mutagenesis to create acetylation-deficient IRF-2 mutants.
- Reporter gene assays to measure promoter activity.
- Chromatin immunoprecipitation (ChIP) assays to assess promoter binding in vivo.
Main Results:
- Lys-75 and Lys-78 in the DNA binding domain (DBD) were identified as major IRF-2 acetylation sites.
- Acetylation of IRF-2 did not affect in vitro DNA binding, but mutation of Lys-75 impaired IRF-2-dependent histone H4 promoter activation.
- IRF-2 acetylation and H4 promoter activity were observed only in growing cells, not in growth-arrested cells.
- Mutation of Lys-78 abolished DNA binding activity, independent of acetylation.
- IRF-2 interacted with p300 and bound to the H4 promoter in growing cells, as shown by ChIP.
Conclusions:
- IRF-2 acetylation occurs in a cell growth-dependent manner.
- Lys-75 acetylation is essential for IRF-2's role in transcribing cell growth-regulated promoters, like histone H4.
- These findings highlight the importance of IRF-2 post-translational modification in linking cell growth and transcriptional regulation.
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