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Updated: Sep 25, 2026

Assessment of Submitochondrial Protein Localization in Budding Yeast Saccharomyces cerevisiae
Published on: July 19, 2021
Trichomonas vaginalis Hmp35, a putative pore-forming hydrogenosomal membrane protein, can form a complex in yeast
Sabrina D Dyall1, Dianna C Lester, Rachel E Schneider
1Department of Microbiology, Immunology, and Molecular Genetics, UCLA, Los Angeles, California 90095-1489 and the Department of Chemistry and Biochemistry and the Molecular Biology Institute, UCLA, Los Angeles, California 90095-1569.
Abstract:
An abundant integral membrane protein, Hmp35, has been isolated from hydrogenosomes of Trichomonas vaginalis. This protein has no known homologue and exists as a stable 300-kDa complex, termed HMP35, in membranes of the hydrogenosome. By using blue native gel electrophoresis, we found the HMP35 complex to be stable in 2 m NaCl and up to 5 m urea. The endogenous Hmp35 protein was largely protease-resistant. The protein has a predominantly beta-sheet structure and predicted transmembrane domains that may form a pore. Interestingly, the protein has a high number of cysteine residues, some of which are arranged in motifs that resemble the RING finger, suggesting that they could be coordinating zinc or another divalent cation. Our data show that Hmp35 forms one intramolecular but no intermolecular disulfide bonds. We have isolated the HMP35 complex by expressing a His-tagged Hmp35 protein in vivo followed by purification with nickel-agarose beads. The purified 300-kDa complex consists of mostly Hmp35 with lesser amounts of 12-, 25-27-, and 32-kDa proteins. The stoichiometry of proteins in the complex indicates that Hmp35 exists as an oligomer. Hmp35 can be targeted heterologously into yeast mitochondria, despite the lack of homology with any yeast protein, demonstrating the compatibility of mitochondrial and hydrogenosomal protein translocation machineries.
Insights
Researchers isolated the Hmp35 protein complex from Trichomonas vaginalis hydrogenosomes. This stable, abundant protein complex exhibits protease resistance and can be targeted to yeast mitochondria, suggesting conserved protein translocation machinery.
Area of Science:
- Cell Biology
- Parasitology
- Protein Biochemistry
Background:
- Hmp35 is an abundant integral membrane protein found in Trichomonas vaginalis hydrogenosomes.
- This protein lacks known homologs and forms a stable 300-kDa complex (HMP35) within hydrogenosome membranes.
Purpose of the Study:
- To characterize the Hmp35 protein complex, including its stability, structure, and composition.
- To investigate the protein's potential function and its targeting mechanisms.
Main Methods:
- Blue native gel electrophoresis to assess complex stability.
- Protease resistance assays.
- Protein purification using His-tagged expression and nickel-agarose chromatography.
- Heterologous targeting into yeast mitochondria.
Main Results:
- The HMP35 complex is highly stable, resisting 2 M NaCl and 5 M urea, and the endogenous Hmp35 protein is largely protease-resistant.
- Hmp35 possesses a beta-sheet structure, predicted transmembrane domains, and numerous cysteine residues, potentially involved in cation coordination.
- The purified 300-kDa complex comprises predominantly Hmp35, with minor amounts of other proteins, indicating Hmp35 exists as an oligomer.
- Hmp35 can be successfully targeted into yeast mitochondria, irrespective of sequence homology.
Conclusions:
- Hmp35 forms a stable, oligomeric complex within hydrogenosomes with unique structural features.
- The conserved protein translocation machinery between hydrogenosomes and mitochondria is highlighted by the heterologous targeting of Hmp35.
- Further research into Hmp35's function and its role in hydrogenosome biology is warranted.
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