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Updated: Sep 25, 2026

Ultra-Fast Amplicon-Based Next-Generation Sequencing in Non-Squamous Non-Small Cell Lung Cancer
Published on: September 8, 2023
Mutational analysis of the transforming growth factor beta receptor type I gene in primary non-small cell lung cancer
Hong-Tao Zhang1, Qing-Yan Fei, Feng Chen
1Laboratory of Population and Quantitative Genetics, The State Key Laboratory of Genetic Engineering, Institute of Genetics, Morgan-Tan International Center for Life Sciences, Fudan University, Shanghai 200433, P.R. China.
Abstract:
Transforming growth factor-beta receptor-dependent signals are critical for cell growth and differentiation and are often disrupted during tumorigenesis. The entire coding region of TGFbetaRI and flanking intron sequences from 53 primary non-small cell lung cancer (NSCLC) tissues were examined for alterations using SSCP and direct sequencing. No somatic point mutations other than two silent mutations and a polymorphism were found in the TGFbetaRI gene. The two silent mutations located at codon 344 (AAT to AAC) and codon 406 (TTA to CTA), respectively, and the polymorphism was at the 24th base of intron 7 (G to A). To investigate whether the presence of this polymorphism is associated with NSCLC, we determined its allele distribution in all the 53 carcinomas and 89 normal controls. Interestingly, we found that the subjects with homozygous genotype A/A displayed more than 3-fold increased risk of developing NSCLC than the common wild genotype G/G. As the first report, the present study showed that TGFbetaRI gene is not a frequent site of spontaneous mutational inactivation while the detected polymorphism is frequent in the pathogenesis of NSCLC.
Insights
Transforming growth factor-beta receptor type I (TGFbetaRI) gene mutations are rare in non-small cell lung cancer (NSCLC). However, a specific TGFbetaRI polymorphism significantly increases NSCLC risk.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Transforming growth factor-beta receptor-dependent signals regulate cell growth and differentiation.
- Disruptions in these signals are implicated in tumorigenesis, particularly in non-small cell lung cancer (NSCLC).
Purpose of the Study:
- To investigate alterations in the TGFbetaRI gene in primary NSCLC tissues.
- To determine the association between a specific TGFbetaRI gene polymorphism and NSCLC risk.
Main Methods:
- Analysis of the entire coding region and flanking introns of the TGFbetaRI gene in 53 NSCLC tissues using SSCP and direct sequencing.
- Genotyping of a TGFbetaRI intron 7 polymorphism (G to A) in 53 NSCLC cases and 89 normal controls.
Main Results:
- No somatic point mutations were identified in the TGFbetaRI coding region, except for two silent mutations.
- A polymorphism at the 24th base of intron 7 (G to A) was identified.
- Homozygous genotype A/A for this polymorphism was associated with a greater than 3-fold increased risk of developing NSCLC compared to the wild genotype G/G.
Conclusions:
- The TGFbetaRI gene is not a frequent site of spontaneous mutational inactivation in NSCLC.
- The identified TGFbetaRI intron 7 polymorphism is frequent and may play a role in NSCLC pathogenesis.
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