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Published on: January 27, 2019
Development of the intestinal bacterial composition in hospitalized preterm infants in comparison with breast-fed,
Andreas Schwiertz1, Bärbel Gruhl, Manuela Löbnitz
1Deutsches Institut für Ernaehrungsforschung, Abteilung Gastrointestinale Mikrobiologie, Bergholz-Rehbrücke, Germany. andreas.schwiertz@mikrooek.de
Insights
Hospitalized preterm infants develop similar gut bacterial communities within weeks, unlike breast-fed full-term infants. This study tracked neonatal microbiota establishment using PCR-DGGE analysis.
Area of Science:
- Microbiology
- Neonatalogy
- Gastroenterology
Background:
- The neonatal gut microbiota is crucial for infant health.
- Previous studies on preterm infant microbiota were limited by outdated methods.
- Understanding early microbial community development in hospitalized preterm infants is vital.
Purpose of the Study:
- To investigate the establishment and succession of bacterial communities in hospitalized preterm infants.
- To compare the neonatal microbiota of preterm infants with that of breast-fed, full-term infants.
- To identify factors influencing neonatal microbiota development.
Main Methods:
- Analysis of 16S ribosomal DNA (rDNA) in fecal samples using PCR-denaturing gradient gel electrophoresis (PCR-DGGE).
- Monitoring of 29 hospitalized preterm infants over the first 4 weeks of life.
- Comparison with fecal samples from 15 breast-fed, full-term infants and clinical bacterial isolates.
Main Results:
- Bacterial community complexity increased over time in preterm infants.
- Both intraindividual and interindividual bacterial similarity increased significantly in preterm infants.
- Hospitalized preterm infants developed highly similar gut bacterial communities compared to breast-fed, full-term infants.
- Common bacteria included Escherichia coli, Enterococcus sp., and Klebsiella pneumoniae.
- Microbiota similarity was not significantly influenced by birth weight, diet, or antibiotic treatment.
Conclusions:
- Hospitalized preterm infants acquire a remarkably similar gut microbiota composition.
- The development of a similar neonatal microbiota in preterm infants differs from that in full-term infants.
- Early gut microbial succession in preterm infants is robust and shows convergence despite potential confounding factors.
Abstract:
The establishment and succession of bacterial communities in hospitalized preterm infants has not been extensively studied. Because earlier studies depended on classical cultural techniques, their results were limited. This study monitored the establishment and succession of the neonatal microbiota in the first weeks of life by analyzing the 16S rDNA variety in fecal samples applying PCR-denaturing gradient gel electrophoresis (PCR-DGGE). Fecal samples from 29 preterm infants hospitalized in a neonatal intensive care unit, including samples from antibiotic-treated infants and one with neonatal necrotizing enterocolitis, were subjected to PCR-DGGE analysis. Daily DGGE profiles from all preterm infants during the first 4 wk were obtained and analyzed. In addition, feces of 15 breast-fed, full-term infants and a variety of clinical bacterial isolates were examined and compared with the PCR-DGGE profiles of the preterm infants. During the first days of life, the DGGE profiles were rather simple but increased in their complexity over time. It became obvious that not only the intraindividual band-pattern similarity increased over time, but also the interindividual. During the observation period, similarity values (Cs) increased in each preterm infant from 0 to 80%, whereas interindividual Cs increased from 18.1 to 57.4%, revealing the acquisition of a highly similar bacterial community in these infants. In contrast, Cs-values obtained for breast-fed, full-term infants were rather low (11.2%). Escherichia coli, Enterococcus sp., and Klebsiella pneumoniae were the bacteria most commonly found in all preterm infants. The interindividual bacterial composition in hospitalized preterm infants is more similar in comparison with breast-fed, full-term infants and is not necessarily influenced by birth weight, diet, or antibiotic treatment.
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