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Updated: Aug 9, 2026

DNA Fingerprinting of Mycobacterium leprae Strains Using Variable Number Tandem Repeat (VNTR) - Fragment Length Analysis (FLA)
Published on: July 15, 2011
False-positive Mycobacterium tuberculosis culture revealed by restriction fragment length polymorphism analysis
O D Schoch1, G E Pfyffer, D Buhl
1Department of Internal Medicine, Division of Pneumology, Kantonsspital St. Gallen, CH-9007 St. Gallen, Switzerland. otto.schoch@kssg.ch
Background:
The microbiological analysis of respiratory specimens is the most reliable approach to diagnose active pulmonary tuberculosis.
Patient And Methods:
We report a 60-year-old female patient (index patient) who underwent diagnostic bronchoscopy for chronic cough. No acid-fast bacilli were detected in bronchial washings. Although cough subsided with symptomatic treatment, Mycobacterium tuberculosis grew on egg-based media after 12 weeks. A false-positive culture result was suspected. Chart review and DNA fingerprinting were carried out.
Results:
The bronchoscope used to examine the index patient was previously used for a 30-year-old patient (source patient) with smear- and culture-positive pulmonary tuberculosis. Restriction fragment length polymorphism (RFLP) analysis based on the IS 6110 element confirmed that the two strains were identical.
Conclusion:
Cross-contamination is a reason for false-positive cultures with M. tuberculosis and should be suspected in patients with a low clinical probability for active tuberculosis.
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