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DNA polymerase zeta: new insight into eukaryotic mutagenesis and mammalian embryonic development
1Department of Pathophysiology, Zhejiang University School of Medicine, Hangzhou 310031, Zhejiang Province, China.
Abstract:
Information about the mechanisms that generate mutations in eukaryotes is likely to be useful for understanding human health concerns, such as genotoxicity and cancer. Eukaryotic mutagenesis is largely the outcome of attacks by endogenous and environmental agents. Except for DNA repair, cell cycle checkpoints and DNA damage avoidance, cells have also evolved DNA damage tolerance mechanism, by which lesion-targeted mutation might occur in the genome during replication by specific DNA polymerases to bypass the lesions (translesion DNA synthesis, TLS), or mutation on undamaged DNA templates (untargeted mutation) might be induced. DNA polymerase zeta (pol zeta), which was found firstly in budding yeast Saccharomyces cerevisiae and consists of catalytic subunit scRev3 and stimulating subunit scRev7, has received more attention in recent years. Pol zeta is a member of DNA polymerase eta subfamily, which belongs to DNA polymerase B family, and exists in almost all eukaryotes. Human homolog of the scRev3 gene is located in chromosome region 6q21, and the mouse equivalent maps to chromosome 10, distal to the c-myb gene and close to the Macs gene. Alternative splicing, upstream out-of frame ATG can be found in yeast scRev3, mouse and human homologs. Furthermore, the sequence from 253-323 immediate upstream of the AUG initiator codon has the potential to form a stem-loop hairpin secondary structure in REV3 mRNA, suggesting that human REV3 protein may be expressed at low levels in human cells under normal growth conditions. The functional domain analysis showed that yeast Rev3-980 tyrosine in conserved region II is at the polymerase active site. Human REV3 amino acid residues 1 776-2 195 provide a REV7 binding domain, and REV7 amino acid residues 1-211 provide a bind domain for REV1, REV3 and REV7 itself. More interestingly, REV7 interacts with hMAD2 and therefore might function in the cell cycle control by affecting the activation of APC (anaphase promoting complex). Currently it has been known that pol zeta is involved in most spontaneous mutation, lesion-targeted mutation via TLS, chemical carcinogen induced untargeted mutation and somatic hypermutation of antibody genes in mammalian. In TLS pathway, pol zeta acts as a "mismatch extender" with combination of other DNA polymerases, such as pol iota. Unlike in yeast, it was found that pol zeta also functioned in mouse embryonic development more recently. It was hypothesized that the roles of pol zeta in TLS and cell cycle control might contribute to mouse embryonic lethality.
Insights
DNA polymerase zeta (pol zeta) is crucial for DNA damage tolerance and mutation generation in eukaryotes. Its roles in translesion DNA synthesis (TLS) and cell cycle control may explain embryonic lethality in mice.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Eukaryotic mutagenesis arises from endogenous and environmental agents.
- Cells possess DNA repair, checkpoints, and DNA damage tolerance (DDT) mechanisms.
- DDT involves translesion DNA synthesis (TLS) using specialized DNA polymerases to bypass lesions.
Purpose of the Study:
- To investigate the role of DNA polymerase zeta (pol zeta) in eukaryotic mutagenesis.
- To understand the structural and functional characteristics of pol zeta.
- To explore the involvement of pol zeta in DNA damage tolerance and cell cycle control.
Main Methods:
- Analysis of pol zeta structure and function in yeast and mammalian systems.
- Investigating the interaction of pol zeta subunits (Rev3 and Rev7).
- Examining the role of pol zeta in TLS and its potential involvement in cell cycle regulation.
Main Results:
- Pol zeta, composed of scRev3 and scRev7, is conserved across eukaryotes.
- Functional domains identified in yeast and human pol zeta subunits.
- REV7 interacts with hMAD2, suggesting a role in cell cycle control via APC activation.
- Pol zeta is implicated in spontaneous mutations, TLS, chemically induced mutations, and antibody gene hypermutation.
- Pol zeta functions in mouse embryonic development, potentially linking TLS and cell cycle roles to embryonic lethality.
Conclusions:
- Pol zeta is a key player in various mutagenic processes, including TLS.
- Its interaction with cell cycle regulators suggests a dual role in DNA damage tolerance and cell cycle control.
- Pol zeta's functions are essential for mammalian development, and its dysregulation may lead to developmental defects.