Orphan nuclear receptors: from new ligand discovery technologies to novel signaling pathways

A K Shiau1, P Coward, M Schwarz

  • 1Tularik Inc., Two Corporate Drive, South San Francisco, CA 94080, USA.

Current Opinion in Drug Discovery & Development
|June 27, 2003
PubMed

Insights

Biochemical assays identify ligands for orphan nuclear receptors by detecting coactivator recruitment. These ligands reveal new signaling pathways and have potential clinical applications.

Area of Science:

  • Molecular Biology
  • Endocrinology
  • Genetics

Background:

  • Nuclear receptors are crucial transcription factors regulating development, differentiation, and homeostasis.
  • Their function is modulated by interactions with transcriptional coactivators, influenced by receptor agonists and antagonists.
  • Orphan nuclear receptors lack known endogenous ligands, posing a challenge for functional studies.

Purpose of the Study:

  • To review the application of coactivator recruitment assays in identifying ligands for orphan nuclear receptors.
  • To highlight the discovery of novel biological signaling pathways mediated by these identified ligands.
  • To discuss the potential clinical implications of targeting these nuclear receptor-ligand interactions.

Main Methods:

  • Utilizing biochemical assays that measure ligand-binding through coactivator recruitment.
  • Applying these assays to orphan nuclear receptor subfamilies, including liver X receptor, farnesoid X receptor, and estrogen receptor-related receptors.
  • Analyzing the identified ligands for their role in uncovering new biological signaling.

Main Results:

  • Successful identification of naturally occurring and synthetic ligands for several orphan nuclear receptors.
  • Demonstration of how these ligands facilitate the discovery of previously unknown biological signaling pathways.
  • Evidence suggesting potential therapeutic applications for the identified ligands and pathways.

Conclusions:

  • Coactivator recruitment assays are powerful tools for discovering ligands for orphan nuclear receptors.
  • Ligand identification has significantly advanced our understanding of nuclear receptor-mediated signaling.
  • Targeting these newly discovered pathways holds promise for future clinical interventions.

Related Concept Videos

Interactions Between Signaling Pathways01:19

Interactions Between Signaling Pathways

Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
Receptor Tyrosine Kinases01:26

Receptor Tyrosine Kinases

Receptor tyrosine kinases or RTKs are membrane-bound receptors that phosphorylate specific tyrosine on protein substrates. RTKs regulate cellular growth, differentiation, survival, and migration. They contain an extracellular ligand binding domain, a transmembrane domain, and a cytosolic tail with intrinsic kinase activity. Several extracellular signaling molecules activate RTKs in one or more ways and relay the signal downstream. Ligands such as platelet-derived growth factor (PDGF) or...
G Protein-coupled Receptors01:15

G Protein-coupled Receptors

G Protein-Coupled Receptors or GPCRs are membrane-bound receptors that transiently associate with heterotrimeric G proteins and induce an appropriate response to sensory stimuli such as light, odors, hormones, cytokines, or neurotransmitters.
GPCRs are also called heptahelical, 7TM, or serpentine receptors, and consist of seven (H1-H7) transmembrane alpha-helices that span the bilayer to form a cylindrical core. The transmembrane helices are connected by three extracellular loops and three...
Signal Transduction: Overview01:26

Signal Transduction: Overview

Cells respond to many types of information, often through receptor proteins positioned on the membrane. They respond to chemical signals, such as hormones, neurotransmitters, and other signaling molecules, initiating a series of molecular reactions to produce an appropriate response. This is called signal transduction. Cells also coordinate different responses elicited by the same signaling molecule via mediators, allowing molecular cross-talk.
Typically, signal transduction involves three...
Transducer Mechanism: Enzyme-Linked Receptors01:27

Transducer Mechanism: Enzyme-Linked Receptors

Enzyme-linked receptors are cell-surface receptors acting as an enzyme or associating with an enzyme intracellularly. They make excellent drug targets. Drugs can bind to the extracellular ligand-binding domain or directly affect their enzymatic domain and alter their activity.
Major types that are helpful drug targets include: