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Updated: Sep 23, 2026

Electrophoretic Analysis of Replication Through Structure-Prone DNA Repeats Within the SV40-Based Human Episome
Published on: September 13, 2024
Is the simian virus SV40 associated with idiopathic focal segmental glomerulosclerosis in humans?
Gabriella Galdenzi1, Antonio Lupo, Franca Anglani
1Research Center DiaTech, Jesi, Ancona, Italy.
Background:
Glomerulosclerosis was reported in mice transgenic for the simian polyomavirus SV40 early region that contains the transforming sequences encoding the SV40 large T-antigen (TAG). This was discovered when an SV40 epidemic occurred following the use of contaminated polio vaccines during 1955-1963, and led to investigations that showed an association between SV40 infection and tumors in humans. We investigated the possible association of SV40 infection and idiopathic focal segmental glomerulosclerosis (FSGS).
Methods:
The study was performed in 17 Bouin-fixed, paraffin-embedded renal biopsies from FSGS patients and 10 matched biopsies from patients with IgA glomerulonephritis; all patients had undergone polio vaccination in the early 1960s. Extracted DNA was polymerase chain reaction (PCR) amplified using SV.for3/SV.rev primers and GabE1/GabE2 primers; both sets of primers map in the region of SV40 TAG sequences, and amplify a fragment of respectively 105-bp and 135-bp. The biopsies considered were those in which the DNA was sufficiently intact to allow amplification of a fragment of 102-bp of the ApoE gene.
Results:
Three FSGS and none of the IgA biopsies were positive for the SV.for3/SV.rev fragment. Conversely, amplification with GabE1/GabE2 primers did not lead to any specific product in either the IgA or FSGS biopsies. Restriction fragment length polymorphism and sequencing analyses revealed that the positive results obtained with the SV.for3/SV.rev primers were due to amplicons generated by multiple dimerization of forward and reverse primers.
Conclusions:
With the limited number of patients investigated, this study excludes the hypothesis that SV40 is associated with idiopathic FSGS.
Insights
This study investigated the simian polyomavirus SV40's potential link to idiopathic focal segmental glomerulosclerosis (FSGS). Our findings exclude SV40 as a cause of FSGS in patients vaccinated in the 1960s.
Area of Science:
- Nephrology
- Virology
- Molecular Biology
Background:
- Simian polyomavirus SV40 large T-antigen (TAG) has been linked to glomerulosclerosis in mice.
- SV40 infection has been associated with human tumors.
- Previous research explored a potential link between SV40 and idiopathic focal segmental glomerulosclerosis (FSGS).
Purpose of the Study:
- To investigate the association between SV40 infection and idiopathic FSGS in humans.
- To determine if SV40 DNA is detectable in renal biopsies of FSGS patients.
Main Methods:
- Analysis of 17 renal biopsies from FSGS patients and 10 from IgA glomerulonephritis patients, all vaccinated in the early 1960s.
- Polymerase chain reaction (PCR) amplification of SV40 large T-antigen (TAG) sequences using specific primers.
- DNA integrity confirmed by amplifying the ApoE gene fragment.
Main Results:
- One set of primers (SV.for3/SV.rev) yielded a positive fragment in three FSGS biopsies, but this was attributed to primer-dimer artifacts.
- Another set of primers (GabE1/GabE2) produced no specific product in any biopsy.
- No evidence of SV40 DNA was found in either FSGS or IgA glomerulonephritis patient biopsies.
Conclusions:
- The study did not find evidence supporting an association between SV40 and idiopathic FSGS.
- The limited sample size necessitates further investigation, but current data exclude SV40 as a cause of FSGS.
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