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Updated: May 28, 2026

Assessment of Selective mRNA Translation in Mammalian Cells by Polysome Profiling
Published on: October 28, 2014
Cell cycle-dependent translation of p27 involves a responsive element in its 5'-UTR that overlaps with a uORF
Ulrich Göpfert1, Michael Kullmann, Ludger Hengst
1Max-Planck-Institut für Biochemie, Am Klopferspitz 18a, D-82152 Martinsried, Germany.
Abstract:
p27(Kip1) regulates cell proliferation by binding to and modulating the activity of cyclin-dependent kinases. The CDK inhibitor is haploinsufficient for tumor suppression and reduced p27 activity is fundamental for the development of many human malignancies. Consistently, reduced p27 protein provides independent prognostic information in various tumors including breast, prostate, colon and gastric carcinomas. In normal cells, p27 protein increases in growth arrest but also oscillates during cell cycle progression. Expression of p27 is regulated through mechanisms including transcription, translation and ubiquitin-mediated degradation. Each of these pathways may contribute to deregulation of p27 in hyperproliferative diseases. p27 translation increases in proliferating cells during G(1) phase and declines as cells enter S phase. To investigate the mechanisms of p27 translational control, we analyzed fragments of the p27 transcript for their contribution to cell cycle regulated translation. We found that an element in the p27 5'-UTR can render reporter translation cell cycle sensitive with maximal translation in G1-arrested cells. This novel element of 114 nt contains a G/C-rich hairpin domain that is predicted to form multiple stable stemloops and also overlaps with a small upstream ORF (uORF). Both structures contribute to cell cycle-regulated translation. The uORF can be translated in vitro and its sequence and position are highly conserved in mice and chickens. Interestingly, the precise sequence or the length of the uORF-encoded peptide are not important for p27 translation, consistent with the idea that ribosomal recruitment to its initiation codon rather than the translation product itself contributes to the regulation.
Insights
The p27 protein
Area of Science:
- Molecular Biology
- Cell Biology
- Oncology
Background:
- p27(Kip1) is a cyclin-dependent kinase inhibitor crucial for regulating cell proliferation.
- Reduced p27 protein levels are linked to various human malignancies and serve as a prognostic marker.
- p27 expression is tightly controlled by transcription, translation, and degradation, with dysregulation contributing to hyperproliferation.
Purpose of the Study:
- To investigate the mechanisms controlling p27 (Kip1) translation during the cell cycle.
- To identify specific elements within the p27 transcript responsible for cell cycle-regulated translation.
Main Methods:
- Analysis of p27 transcript fragments to assess their role in cell cycle-regulated translation.
- Use of reporter assays to measure translation driven by p27 transcript elements.
- In vitro translation assays to study the function of upstream open reading frames (uORFs).
Main Results:
- A novel 114-nucleotide element in the p27 5'-untranslated region (UTR) confers cell cycle sensitivity to reporter translation, peaking in G1-arrested cells.
- This regulatory element features a G/C-rich hairpin domain and an overlapping small upstream ORF (uORF).
- Both the hairpin structure and the uORF contribute to cell cycle-regulated translation; the uORF's initiation codon, not its peptide product, is critical for regulation.
Conclusions:
- The p27 5'-UTR contains a novel regulatory element that controls protein translation in a cell cycle-dependent manner.
- This element, involving a hairpin structure and a uORF, ensures maximal p27 translation in G1-arrested cells.
- The findings highlight translational control as a key mechanism in p27 regulation and offer insights into its role in cell proliferation and cancer.
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