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Updated: Sep 23, 2026

Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance
Published on: December 28, 2017
[Molecular epidemiologic surveillance and antifungal agent sensitivity of Candida albicans isolated from anesthesia
Zeynep Gülay1, Cem Ergon, Aydan Ozkütük
1Dokuz Eylül Universitesi Tip Fakültesi Hastanesi, Mikrobiyoloji ve Klinik Mikrobiyoloji Anabilim Dali, Izmir.
Abstract:
Patients in intensive care units (ICU) are at risk of nosocomial infections. The incidence of nosocomial fungal infections has increased in parallel with the increase of nosocomial infections. Candida albicans is the most frequent pathogenic species among the fungi. The aim of this study was to make an epidemiological surveillance of C. albicans urine isolates which were isolated from patients who were hospitalized in ICU between June 2000 and October 2001 by antifungal susceptibility testing and Randomly Amplified Polymorphic DNA (RAPD) analysis. For this purpose, 38 C. albicans which were isolated from 29 patients were investigated for amphotericin B and fluconazole susceptibility with the microdilution method. The range of minimal inhibitory concentration (MIC) of amphotericin B was between 0.25-1 microgram/ml and MIC50 value was 0.5 microgram/ml and none of the isolates had high (MIC > 1 microgram/ml) MIC values. The MIC values for fluconazole varied between 0.25-16 micrograms/ml and MIC50 value was 1 microgram/ml. While none of the isolates was resistant to fluconazole, two isolates were detected as dose dependent susceptible. RAPD analysis was performed with two different primers in order to investigate clonal relationship, and 22 patterns were detected with one of the primers and 24 patterns were detected with the other. In conclusion, it is thought that the origin of the C. albicans urine isolates were mostly endogenous but exogenous spread might also be considered as isolates that were clonally related were isolated from different patients at the same time interval.
Insights
Nosocomial fungal infections, particularly Candida albicans, are a growing concern in intensive care units (ICUs). This study monitored C. albicans urine isolates, finding susceptibility to antifungals but evidence of both endogenous and exogenous spread among patients.
Area of Science:
- Medical Microbiology
- Infectious Diseases
- Epidemiology
Background:
- Intensive care unit (ICU) patients face increased risk of nosocomial infections.
- Nosocomial fungal infections, especially from Candida albicans, are rising.
- Candida albicans is the most common fungal pathogen in healthcare settings.
Purpose of the Study:
- To conduct epidemiological surveillance of Candida albicans urine isolates from ICU patients.
- To assess antifungal susceptibility and genetic relatedness of C. albicans isolates.
- To investigate potential sources of C. albicans infections in ICUs.
Main Methods:
- Collected and analyzed 38 C. albicans urine isolates from 29 ICU patients between June 2000 and October 2001.
- Determined antifungal susceptibility to amphotericin B and fluconazole using microdilution method (MIC).
- Employed Randomly Amplified Polymorphic DNA (RAPD) analysis with two primers to evaluate clonal relationships.
Main Results:
- Amphotericin B showed low minimal inhibitory concentration (MIC) values (MIC50 = 0.5 µg/ml), with no high-level resistance.
- Fluconazole MIC values ranged from 0.25-16 µg/ml (MIC50 = 1 µg/ml); no resistance was observed, but two isolates were dose-dependent susceptible.
- RAPD analysis revealed significant genetic diversity, with 22 and 24 distinct patterns using two different primers, suggesting multiple C. albicans strains.
Conclusions:
- The majority of C. albicans urine isolates likely originated endogenously from patients.
- Exogenous spread of C. albicans between patients is also a possibility, indicated by clonally related isolates found in different patients concurrently.
- Findings highlight the need for continued surveillance and infection control measures against C. albicans in ICUs.
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