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Updated: Sep 23, 2026

Bioreactor Assembly for Continuous Culture of Complex Fecal Communities
Published on: April 25, 2025
Production process monitoring by serial mapping of microbial carbon flux distributions using a novel sensor reactor
M El Massaoudi1, J Spelthahn, A Drysch
1Institute of Biotechnology, Research Center Juelich, Forschungszentrum Julich, 52425, Juelich, Germany
Abstract:
A novel Sensor Reactor technology is presented which permits 13C labeling experiments for metabolic flux analysis during large-scale, semi-industrial, (fed-) batch fermentation processes deriving a series of flux maps that document fermentation courses in detail. The small-scale Sensor Reactor can be inoculated within 1.50-1.20s via a special inoculation unit with an inoculation volume accuracy of 1.025+/-0.021 L. The large-scale production reactor (here: 300 L) and the Sensor Reactor were run in parallel master/slave modes to control the current pH, temperature, pressure and dissolved oxygen values as changing set points for the Sensor Reactor. Using an automated pulsing technology, glucose pulses of 5 g/L could be realized within 0.51 s. The similarity of fermentations in the Sensor Reactor with the production process was demonstrated by studying L-lysine production with C. glutamicum during multiple, 'simulated' labeling experiments each lasting 2.5h. 'Real' labeling experiments are presented in Part II.
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