Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Experiment Videos

COmplete GENome Tracking (COGENT): a flexible data environment for computational genomics.

Paul Janssen1, Anton J Enright, Benjamin Audit

  • 1Computational Genomics Group, The European Bioinformatics Institute, EMBL Cambridge Outstation, Welcome Trust Genome Campus, Cambridge CB10 1SD, UK.

Bioinformatics (Oxford, England)
|July 23, 2003
PubMed
Summary
This summary is machine-generated.

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Rethinking molecular evolution through protein language model embeddings.

Trends in genetics : TIG·2026
Same author

CV19global: harmonized epidemiology, policy, mobility and weather indicators from two years and 54 countries.

Scientific data·2026
Same author

The total eclipse of bioinformatics: From disruption to convention, and a gentle warning.

PLoS computational biology·2026
Same author

Asymmetric divergence of genome organization and transcription beyond LUCA.

Bio Systems·2026
Same author

PymiRa: A rapid and accurate classification tool for small non-coding RNAs, including microRNAs.

PLoS computational biology·2026
Same author

Peer-review ownership in the AI era.

EMBO reports·2026

A new database of fully sequenced genomes is available to improve data sharing and reproducibility in computational genomics. Its simple design links genome data to other resources effectively.

Area of Science:

  • Genomics
  • Bioinformatics
  • Computational Biology

Background:

  • The field of computational genomics requires accessible and reproducible data.
  • Existing genome databases may lack efficient data linking capabilities.

Purpose of the Study:

  • To present a database of fully sequenced and published genomes.
  • To facilitate data re-distribution and enhance result reproducibility in computational genomics.
  • To implement a schema for linking genome sequence data to other resources.

Main Methods:

  • Development of a database for fully sequenced genomes.
  • Implementation of a simple and powerful schema for data linking.

Main Results:

  • A database is now available for computational genomics research.

Related Experiment Videos

  • The schema allows for effective linking of genome sequence data.

    • Conclusions:

    • The presented database supports data re-distribution and reproducibility.
    • The implemented schema is effective for integrating genome data with other resources.