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Rapid Synthesis and Screening of Chemically Activated Transcription Factors with GFP-based Reporters
Published on: November 26, 2013
Activation functions 1 and 2 of nuclear receptors: molecular strategies for transcriptional activation
Anette Wärnmark1, Eckardt Treuter, Anthony P H Wright
1Department of Biosciences, Novum, Karolinska Institutet, SE-141 57 Huddinge, Sweden. anette.warnmark@biosci.ki.se.
Abstract:
Nuclear receptors (NRs) comprise a family of ligand inducible transcription factors. To achieve transcriptional activation of target genes, DNA-bound NRs directly recruit general transcription factors (GTFs) to the preinitiation complex or bind intermediary factors, so-called coactivators. These coactivators often constitute subunits of larger multiprotein complexes that act at several functional levels, such as chromatin remodeling, enzymatic modification of histone tails, or modulation of the preinitiation complex via interactions with RNA polymerase II and GTFs. The binding of NR to coactivators is often mediated through one of its activation domains. Many NRs have at least two activation domains, the ligand-independent activation function (AF)-1, which resides in the N-terminal domain, and the ligand-dependent AF-2, which is localized in the C-terminal domain. In this review, we summarize and discuss current knowledge regarding the molecular mechanisms of AF-1- and AF-2-mediated gene activation, focusing on AF-1 and AF-2 conformation and coactivator binding.
Insights
Nuclear receptors (NRs) activate genes by recruiting coactivators. This review details how activation functions (AF-1 and AF-2) within NRs bind coactivators to regulate transcription.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Nuclear receptors (NRs) are ligand-inducible transcription factors crucial for gene regulation.
- NRs recruit coactivators to modulate gene expression via chromatin remodeling and preinitiation complex interactions.
Purpose of the Study:
- To review the molecular mechanisms of NR-mediated gene activation.
- To focus on the roles of activation function 1 (AF-1) and activation function 2 (AF-2) in coactivator binding and transcriptional regulation.
Main Methods:
- Literature review and synthesis of current research on nuclear receptor function.
- Analysis of structural and functional data regarding AF-1 and AF-2 domains.
Main Results:
- NRs utilize distinct activation domains, AF-1 (ligand-independent) and AF-2 (ligand-dependent), for coactivator recruitment.
- Coactivators are integral components of multiprotein complexes that facilitate transcription.
- NR-coactivator interactions are modulated by the conformation of AF-1 and AF-2.
Conclusions:
- Understanding AF-1 and AF-2 mechanisms is key to deciphering NR-mediated gene activation.
- The conformational dynamics of these domains directly impact coactivator binding and transcriptional output.
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