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Published on: June 13, 2021
Non-AUG translation initiation of mRNA encoding acidic ribosomal P2A protein in Candida albicans
Dariusz Abramczyk1, Marek Tchórzewski, Nikodem Grankowski
1Maria Curie-Skłodowska University, Institute of Microbiology and Biotechnology, Department of Molecular Biology, Akademicka Street 19, 20-033 Lublin, Poland.
Abstract:
The eukaryotic 60S ribosomal subunit has a set of very acidic proteins (P-proteins), which form a distinct lateral protuberance called the stalk structure. This protein complex is directly involved in the elongation step of polypeptide synthesis. In our study on acidic ribosomal P-proteins from the human opportunistic pathogen Candida albicans, we isolated and characterized one of the genes, called CARP2A, and its product, the P2A protein. The CARP2A gene is intron-less, present in a single copy per haploid genome, and transcriptionally active. The open reading frame of the studied gene contains information for a sequence of 108 amino acids. Based on this, the molecular mass and isoelectric point of the P2A protein were theoretically calculated to be 10.85 kDa and 3.7, respectively. The characteristic feature of the CARP2A gene transcript is the presence of a GUG start codon, which is rare in eukaryotic organisms and not previously reported in yeast. To our knowledge this is the first report showing the presence of a naturally occurring non-AUG start codon on mRNA in yeast species.
Insights
Researchers identified the CARP2A gene and P2A protein in Candida albicans, crucial for polypeptide synthesis. They discovered a rare GUG start codon in the gene
Area of Science:
- Molecular Biology
- Yeast Genetics
- Protein Biochemistry
Background:
- The 60S ribosomal subunit contains acidic P-proteins forming the stalk structure, essential for polypeptide synthesis elongation.
- Acidic ribosomal P-proteins play a critical role in protein translation.
- Candida albicans is a significant human opportunistic pathogen.
Purpose of the Study:
- To isolate and characterize the CARP2A gene and its P2A protein product in Candida albicans.
- To investigate the genetic and molecular features of a specific acidic ribosomal protein in a pathogenic yeast.
- To identify novel regulatory elements in yeast gene expression.
Main Methods:
- Gene isolation and characterization of CARP2A in Candida albicans.
- Bioinformatic analysis of the CARP2A gene sequence and P2A protein.
- Determination of gene copy number and transcriptional activity.
- Analysis of the start codon in the CARP2A mRNA transcript.
Main Results:
- The CARP2A gene is intron-less, single-copy, and transcriptionally active in Candida albicans.
- The P2A protein is calculated to have a molecular mass of 10.85 kDa and an isoelectric point of 3.7.
- The CARP2A gene transcript utilizes a GUG start codon, a rare occurrence in eukaryotes and previously unreported in yeast.
- This study reports the first instance of a naturally occurring non-AUG start codon on mRNA in yeast.
Conclusions:
- The CARP2A gene and P2A protein are well-characterized components of the Candida albicans ribosome.
- The identification of a GUG start codon in CARP2A mRNA provides new insights into translational initiation mechanisms in yeast.
- This finding expands the understanding of eukaryotic gene expression and translational control in pathogenic fungi.
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