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Updated: Sep 20, 2026

Growth-based Determination and Biochemical Confirmation of Genetic Requirements for Protein Degradation in Saccharomyces cerevisiae
Published on: February 16, 2015
Functional inactivation of the conserved Sem1p in yeast by intrabodies
Mirka Reinman1, Jussi Jäntti, Kaija Alfthan
1VTT Biotechnology, P.O. Box 1500, FIN-02044 VTT, Finland. mirka.reinman@vtt.fi
Abstract:
Intrabody technology was applied to characterize the function and intracellular localization of a highly conserved Saccharomyces cerevisiae Sem1 protein. DSS1, the mammalian homologue of Sem1p, is functionally conserved between yeast and mammalian cells, and in mammalian cells physically interacts with the strong tumour supressor BRCA2. Yeast and the generated intrabodies are thus expected to offer a useful system for studies on Sem1p/DSS1 function. Sem1p-specific antibody isolated from a phage display library was expressed intracellularily and targeted to either the cytosol or the nucleus of yeast cells. Analysis of the applicability of different antibody fragments as intrabodies showed that the Fab intrabody was expressed most efficiently. Expression of nuclear-targeted anti-Sem1p Fab intrabodies inhibited the growth of the sigma1278b yeast strain in a manner similar to deletion of the SEM1 gene. This indicates that the Fab intrabodies interact in vivo with Sem1p and result in inactivation of Sem1p. Localization of the Fab intrabody with or without the nuclear localization signal to the nucleus in Sem1p-dependent manner suggests that Sem1p mediates the nuclear transport of the intrabody without any targeting signal. Our results suggest that Sem1p function in yeast cells is in part manifested in the nucleus.
Insights
Intrabodies targeting Saccharomyces cerevisiae Sem1 protein revealed its nuclear function. Nuclear-localized intrabodies inhibited yeast growth, indicating Sem1 protein inactivation and its role in nuclear transport.
Area of Science:
- Molecular Biology
- Cell Biology
- Yeast Genetics
Background:
- The Sem1 protein in Saccharomyces cerevisiae and its mammalian homologue DSS1 are highly conserved.
- DSS1 interacts with the tumor suppressor BRCA2 in mammalian cells, suggesting a conserved biological role.
- Intrabody technology offers a tool to study intracellular protein function and localization.
Purpose of the Study:
- To characterize the function and intracellular localization of Saccharomyces cerevisiae Sem1 protein using intrabody technology.
- To investigate the conserved function of Sem1p/DSS1 across species.
- To establish a yeast system for studying Sem1p/DSS1 function.
Main Methods:
- Phage display library was used to isolate a Sem1p-specific antibody.
- Antibody fragments (intrabodies) were expressed intracellularly in yeast, targeted to the cytosol or nucleus.
- The efficiency of different antibody fragments (e.g., Fab) as intrabodies was analyzed.
- Yeast growth inhibition assays were performed to assess intrabody function.
Main Results:
- The Fab intrabody fragment demonstrated the highest expression efficiency.
- Nuclear-targeted anti-Sem1p Fab intrabodies significantly inhibited yeast growth, mimicking SEM1 gene deletion.
- In vivo interaction between Fab intrabodies and Sem1p was confirmed, leading to Sem1p inactivation.
- Sem1p mediated the nuclear transport of the intrabody, even without a nuclear localization signal.
Conclusions:
- Sem1 protein plays a crucial role in yeast cell function, partly manifested in the nucleus.
- Intrabody technology is effective for studying conserved protein functions in vivo.
- Sem1 protein is involved in the nuclear transport mechanism within yeast cells.
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