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Updated: Sep 20, 2026

Reconstitution of Msp1 Extraction Activity with Fully Purified Components
Published on: August 10, 2021
Mmm1p spans both the outer and inner mitochondrial membranes and contains distinct domains for targeting and foci
Noriko Kondo-Okamoto1, Janet M Shaw, Koji Okamoto
1Department of Biology, University of Utah, Salt Lake City, Utah 84112, USA. kokamoto@bioscience.utah.edu
Abstract:
In the yeast Saccharomyces cerevisiae, the integral membrane protein Mmm1p is required for maintenance of mitochondrial morphology and retention of mitochondrial DNA (mtDNA). Mmm1p localizes to discrete foci on mitochondria that are adjacent to mtDNA nucleoids in the matrix, raising the possibility that this protein plays a direct role in organizing, replicating, or segregating mtDNA. Although Mmm1p has been shown to cross the outer membrane with its C terminus facing the cytoplasm, the location of the N terminus has not been resolved. Here we show that Mmm1p spans both the outer and inner mitochondrial membranes, exposing its N terminus to the matrix. Surprisingly, deletion of the N-terminal extension decreased steady-state levels of the Mmm1 protein but did not affect mitochondrial morphology or mtDNA maintenance. Moreover, expression of Neurospora crassa MMM1, which naturally lacks a long N-terminal extension, substituted for loss of Mmm1p in budding yeast. These results indicate that the matrix-exposed portion of Mmm1p is not essential for mtDNA nucleoid maintenance. Additional studies revealed that the transmembrane segment and C-terminal domain of Mmm1p are required for foci formation and mitochondrial targeting, respectively. Our data suggest that the double membrane-spanning topology of Mmm1p at the membrane contact site is critical for formation of tubular mitochondria.
Insights
Mitochondrial protein Mmm1p spans both mitochondrial membranes. Its matrix-exposed N-terminus is not essential for mitochondrial DNA maintenance, but its transmembrane domain is crucial for tubular mitochondrial morphology.
Area of Science:
- Cell Biology
- Mitochondrial Biology
- Molecular Genetics
Background:
- Mmm1p is an integral mitochondrial protein essential for mitochondrial morphology and mitochondrial DNA (mtDNA) maintenance in Saccharomyces cerevisiae.
- Mmm1p localizes to foci near mtDNA nucleoids, suggesting a role in mtDNA organization, replication, or segregation.
- Previous studies indicated Mmm1p crosses the outer mitochondrial membrane with its C-terminus exposed to the cytoplasm.
Purpose of the Study:
- To determine the complete topology of Mmm1p, specifically the location of its N-terminus.
- To investigate the role of the N-terminal region in Mmm1p function, including mitochondrial morphology and mtDNA maintenance.
- To identify domains of Mmm1p critical for its localization and function.
Main Methods:
- Immunofluorescence microscopy to visualize Mmm1p localization.
- Biochemical assays to determine protein levels and topology.
- Functional assays assessing mitochondrial morphology and mtDNA retention.
- Complementation studies using homologous genes from other species.
Main Results:
- Mmm1p spans both the outer and inner mitochondrial membranes, with the N-terminus exposed to the mitochondrial matrix.
- Deletion of the N-terminal extension reduced Mmm1p levels but did not impair mitochondrial morphology or mtDNA maintenance.
- The transmembrane segment and C-terminal domain are essential for Mmm1p foci formation and mitochondrial targeting, respectively.
- Expression of a homologous gene from Neurospora crassa lacking a long N-terminal extension could functionally complement the yeast Mmm1p deletion.
Conclusions:
- The matrix-exposed N-terminal region of Mmm1p is dispensable for mtDNA nucleoid maintenance.
- The double membrane-spanning topology of Mmm1p at mitochondrial contact sites is critical for establishing tubular mitochondrial morphology.
- Specific domains of Mmm1p mediate distinct functions, including targeting, foci formation, and membrane topology.
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