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Flavobacterium gelidilacus sp. nov., isolated from microbial mats in Antarctic lakes
Stefanie Van Trappen1, Joris Mergaert1, Jean Swings1
1Laboratorium voor Microbiologie, Vakgroep Biochemie, Fysiologie en Microbiologie, Universiteit Gent, K. L. Ledeganckstraat 35, B-9000 Gent, Belgium.
Abstract:
Twenty-two isolates from microbial mats in eastern Antarctic lakes showed similar fatty acid compositions and were investigated further using a polyphasic taxonomic approach. Repetitive extragenic palindromic DNA-PCR fingerprinting of the 22 strains revealed three groups, and DNA-DNA hybridizations between representatives showed more than 87 % DNA-DNA reassociation with each other. 16S rRNA gene sequence analysis placed two representative strains, LMG 21477(T) and LMG 21619, within the genus Flavobacterium, with 95.1 % sequence similarity to Flavobacterium flevense, 95.0 % to Flavobacterium tegetincola, less than 95 % to other Flavobacterium species and less than 90 % to representatives of other genera. The name Flavobacterium gelidilacus sp. nov. is proposed, with LMG 21477(T) (=DSM 15343(T)) as the type strain, and a description of the species is given on the basis of morphological, biochemical and physiological characteristics and fatty acid composition. The G+C content of the genomic DNA is 30.0-30.4 mol%.