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Related Concept Videos

Crystal Field Theory - Octahedral Complexes02:58

Crystal Field Theory - Octahedral Complexes

Crystal Field Theory
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
Porin Insertion in the Outer Mitochondrial Membrane01:12

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Aquaporins or AQPs are a family of integral membrane proteins whose primary function is to transport water, while some called aquaglyceroporins also transport glycerol. In addition, aquaporins have also been suspected to be involved in transporting volatile substances, such as carbon dioxide and ammonia, across membranes. Such AQPs that act as gas channels are often highly expressed in cells involved in the gaseous exchange, such as red blood cells, epithelial cells, and pulmonary capillaries.
Multi-pass Transmembrane Proteins and β-barrels01:09

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In multi-pass transmembrane proteins, the polypeptide chain crosses the membrane more than once. The transmembrane polypeptide chain either forms an α-helix or β-strand structure. α-Helix containing multi-pass transmembrane proteins are ubiquitous, whereas β-strand containing ones are mainly found in gram-negative bacteria, mitochondria, and chloroplasts.
α-Helix containing multi-pass transmembrane proteins
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Mitochondria, chloroplasts, and gram-negative bacteria have transmembrane, beta-barrel proteins called porins to mediate the free diffusion of ions and metabolites across the membrane. Mitochondrial porin precursors contain conserved amino acid sequences called beta signals at their C-terminal. Beta signals have a  motif of PoXGXXHyXHy (Po-Polar, X-Any amino acid, G-Glycine, Hy-LargeHydrophobic), which are crucial for precursor recognition to initiate precursor assembly. Beta-barrel precursors...
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Pore transport, also known as convective transport, is a process where small molecules like urea, water, and sugars rapidly cross cell membranes as though there were channels or pores in the membrane. Although direct microscopic evidence is limited  but the concept of pores or channels is widely accepted based on physiological evidence. Despite the lack of direct microscopic...

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In vitro Investigation of the MexAB Efflux Pump From Pseudomonas aeruginosa
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Published on: February 17, 2014

Crystal structures explain functional properties of two E. coli porins.

S W Cowan1, T Schirmer, G Rummel

  • 1Department of Structural Biology, University of Basel, Switzerland.

Nature
|August 27, 1992
PubMed
Summary

Bacterial outer membrane porins, which facilitate molecule diffusion, form trimers with beta-barrel structures. Their pore constrictions, influenced by charged loops, determine ion selectivity and explain mutation effects.

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From Constructs to Crystals – Towards Structure Determination of β-barrel Outer Membrane Proteins
09:55

From Constructs to Crystals – Towards Structure Determination of β-barrel Outer Membrane Proteins

Published on: July 4, 2016

Area of Science:

  • Structural biology
  • Microbiology
  • Biophysics

Background:

  • Porins are essential outer membrane proteins in Gram-negative bacteria.
  • They form aqueous channels facilitating the transport of small hydrophilic molecules.
  • Understanding porin structure-function relationships is crucial for comprehending bacterial physiology.

Purpose of the Study:

  • To elucidate the molecular mechanisms underlying porin function.
  • To explain the structural basis of ion selectivity in porin channels.
  • To correlate structural findings with known functional characteristics and mutations.

Main Methods:

  • X-ray crystallography was used to determine the structures of matrix porin and phosphoporin.
  • Analysis of the 16-stranded anti-parallel beta-barrel architecture.
  • Investigation of the role of internal loops in channel constriction and ion selectivity.

Main Results:

  • Crystal structures revealed porins as trimers of identical subunits.
  • Each subunit features a 16-stranded beta-barrel forming a channel.
  • A long internal loop creates a constriction, with charge distribution governing ion selectivity.

Conclusions:

  • The determined structures provide a molecular basis for porin function.
  • Structural insights explain observed ion selectivity and the impact of mutations.
  • This work enhances understanding of transport across the Gram-negative bacterial outer membrane.