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Updated: Aug 8, 2026

Optimized Negative Staining: a High-throughput Protocol for Examining Small and Asymmetric Protein Structure by Electron Microscopy
Published on: August 15, 2014
Dynamic conformations compared for IgE and IgG1 in solution and bound to receptors
This study reveals that both immunoglobulin E (IgE) and immunoglobulin G1 (IgG1) exhibit bent conformations in solution and when bound to receptors. These findings suggest a non-planar Y-shape for both Ig isotypes, impacting their interactions.
Area of Science:
- Immunology
- Biophysics
- Structural Biology
Background:
- Immunoglobulin (Ig) isotypes like IgE and IgG1 play critical roles in immune responses.
- Understanding the dynamic conformations of Ig molecules is essential for elucidating their function.
- Previous studies suggested bent conformations for IgE, but IgG1 dynamics remained less understood.
Purpose of the Study:
- To investigate and compare the dynamic conformations of murine IgE and human IgG1.
- To determine the end-to-end distances and flexibility of IgE and IgG1 in solution and when bound to their respective receptors.
- To assess whether IgG1 also adopts a bent conformation, similar to IgE.
Main Methods:
- Utilized fluorescence resonance energy transfer (FRET) measurements with specific donor and acceptor probes attached to the N-terminal (Fab) and C-terminal (Fc) ends of Ig molecules.
- Studied IgE and IgG1 in solution and when bound to their high-affinity receptors: Fc epsilon RI on RBL cell membranes and Fc gamma RI on U937 cell membranes.
- Employed a collisional quencher to assess segmental flexibility and extract Gaussian distributions of end-to-end distances.
Main Results:
- IgE in solution showed an average end-to-end distance (rho) of 75 Å with a half-width (hw) of 24 Å, and when bound to Fc epsilon RI, rho=71 Å and hw=12 Å.
- IgG1 in solution exhibited an average end-to-end distance of 75 Å.
- IgG1 bound to Fc gamma RI displayed an average end-to-end distance greater than or equal to 85 Å, with a broad distribution (rho=100 Å, hw=88 Å), indicating a significantly bent conformation.
Conclusions:
- Both IgE and IgG1 adopt bent conformations, deviating from a planar Y-shape, in solution and when engaged with their receptors.
- The binding of IgG1 to its receptor (Fc gamma RI) appears to induce a more pronounced bent conformation compared to its solution state.
- These conformational dynamics are crucial for the diverse functions of different immunoglobulin isotypes.
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