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Updated: Jul 31, 2026

Novel RNA-Binding Proteins Isolation by the RaPID Methodology
Published on: September 30, 2016
[Interaction of mRNA of the p53 protein gene with ribosomal RNA]
Abstract:
By blot hybridization we found that DNA fragments of eukaryotic 18 and 28S rRNAs bind specifically with mRNA. In these experiments the in vitro transcribed mRNA of mouse gene p53 was used. In addition we found that both 18 and 28S rRNAs were able to form intermolecular complexes with mRNAs of several genes 18S rRNA-mRNA; 28S rRNA-mRNA, but fail to bind the antisense RNAs of the same genes. The experimental data allow to suppose that 18S and 28S rRNAs carry several fragments that are complementary to some fragments in the mRNA sequences.
Insights
Eukaryotic ribosomal RNAs (rRNAs), specifically 18S and 28S rRNA, can bind to messenger RNAs (mRNAs). This specific binding suggests complementary sequences exist between rRNA and mRNA fragments.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Ribosomal RNAs (rRNAs) are key components of ribosomes, essential for protein synthesis.
- Messenger RNAs (mRNAs) carry genetic code from DNA to ribosomes for translation.
- The precise interactions between rRNA and mRNA are crucial for gene expression regulation.
Purpose of the Study:
- To investigate the specific binding interactions between eukaryotic ribosomal RNAs (rRNAs) and messenger RNAs (mRNAs).
- To determine if rRNA fragments can form complexes with mRNA sequences.
- To explore the potential for sequence complementarity between rRNA and mRNA.
Main Methods:
- Blot hybridization techniques were employed to detect binding between DNA fragments of eukaryotic 18S and 28S rRNAs and mRNA.
- In vitro transcribed mRNA from the mouse p53 gene was used as a model mRNA.
- Intermolecular complex formation between rRNAs and various gene mRNAs was analyzed.
Main Results:
- Specific binding was observed between DNA fragments of eukaryotic 18S and 28S rRNAs and mRNA.
- Both 18S and 28S rRNAs formed intermolecular complexes with mRNAs from several genes.
- No binding was detected between these rRNAs and the antisense RNAs of the same genes.
- Experimental data suggest the presence of complementary fragments within 18S and 28S rRNAs and mRNA sequences.
Conclusions:
- Eukaryotic 18S and 28S rRNAs contain sequences complementary to specific fragments within mRNA.
- These complementary regions facilitate the formation of stable rRNA-mRNA intermolecular complexes.
- This interaction mechanism may play a role in gene regulation or mRNA processing.
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