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Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation
Published on: June 21, 2016
PLZF is a negative regulator of retinoic acid receptor transcriptional activity
Perrine J Martin1, Marie-Hélène Delmotte, Pierre Formstecher
1INSERM U 459 and Ligue Nationale Contre le Cancer, Faculté de Médecine Henri Warembourg, 1 place de Verdun, 59045 Lille cedex, France. p.lefebvre@lille.inserm.fr
Abstract:
BACKGROUND: Retinoic acid receptors (RARs) are ligand-regulated transcription factors controlling cellular proliferation and differentiation. Receptor-interacting proteins such as corepressors and coactivators play a crucial role in specifying the overall transcriptional activity of the receptor in response to ligand treatment. Little is known however on how receptor activity is controlled by intermediary factors which interact with RARs in a ligand-independent manner. RESULTS: We have identified the promyelocytic leukemia zinc finger protein (PLZF), a transcriptional corepressor, to be a RAR-interacting protein using the yeast two-hybrid assay. We confirmed this interaction by GST-pull down assays and show that the PLZF N-terminal zinc finger domain is necessary and sufficient for PLZF to bind RAR. The RAR ligand binding domain displayed the highest affinity for PLZF, but corepressor and coactivator binding interfaces did not contribute to PLZF recruitment. The interaction was ligand-independent and correlated to a decreased transcriptional activity of the RXR-RAR heterodimer upon overexpression of PLZF. A similar transcriptional interference could be observed with the estrogen receptor alpha and the glucocorticoid receptor. We further show that PLZF is likely to act by preventing RXR-RAR heterodimerization, both in-vitro and in intact cells. CONCLUSION: Thus RAR and PLZF interact physically and functionally. Intriguingly, these two transcription factors play a determining role in hematopoiesis and regionalization of the hindbrain and may, upon chromosomal translocation, form fusion proteins. Our observations therefore define a novel mechanism by which RARs activity may be controlled.
Insights
Promyelocytic leukemia zinc finger protein (PLZF) physically interacts with retinoic acid receptors (RARs) independently of ligands. This interaction inhibits RAR transcriptional activity by preventing receptor heterodimerization, revealing a new regulatory mechanism.
Area of Science:
- Molecular Biology
- Gene Regulation
Background:
- Retinoic acid receptors (RARs) are key transcription factors regulating cell proliferation and differentiation.
- Interactions with coregulators modulate RAR activity upon ligand binding.
- Mechanisms controlling ligand-independent RAR activity by intermediary factors are poorly understood.
Purpose of the Study:
- To identify and characterize novel proteins interacting with RARs in a ligand-independent manner.
- To elucidate the functional consequences of RAR interaction with PLZF on transcriptional activity.
- To investigate the mechanism by which PLZF affects RAR function.
Main Methods:
- Yeast two-hybrid assays to identify protein interactions.
- GST-pull down assays to confirm and map protein binding domains.
- Reporter gene assays to assess transcriptional activity.
- In vitro and cellular assays to study protein complex formation.
Main Results:
- PLZF, a transcriptional corepressor, was identified as a RAR-interacting protein.
- The N-terminal zinc finger domain of PLZF mediates binding to the RAR ligand-binding domain.
- PLZF interaction with RARs is ligand-independent and reduces RXR-RAR heterodimer transcriptional activity.
- PLZF inhibits RXR-RAR heterodimerization in vitro and in cells.
Conclusions:
- RARs and PLZF interact physically and functionally.
- PLZF acts as a novel regulator of RAR activity by inhibiting heterodimerization.
- This interaction provides a new mechanism for controlling RAR transcriptional function.
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